Alternatives and similar repositories for StudyGroup

Users that are interested in StudyGroup are comparing it to the libraries listed below

• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• mistrm82 / msu_ngs2015
  DE analysis module for Week3
  ☆66Updated 8 years ago
• hbctraining / Intro-to-DGE
  ☆204Updated 3 months ago
• GSEA-MSigDB / GSEA_R
  Updated implementation of the GSEA-P R application for modern R distributions
  ☆96Updated 3 years ago
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆84Updated 4 months ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆246Updated this week
• crazyhottommy / scATACseq-analysis-notes
  my notes for scATACseq analysis
  ☆128Updated last year
• hbctraining / DGE_workshop_salmon
  ☆72Updated 3 years ago
• SGDDNB / ShinyCell
  Shiny Interactive Web Apps for Single-Cell Data
  ☆191Updated 2 months ago
• erilu / bulk-rnaseq-analysis
  A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…
  ☆90Updated 4 years ago
• Olink-Proteomics / OlinkRPackage
  Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…
  ☆112Updated this week
• zhangyuqing / ComBat-seq
  Batch effect adjustment based on negative binomial regression for RNA sequencing count data
  ☆182Updated 4 years ago
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆87Updated 8 months ago
• hbctraining / Accessing_public_genomic_data
  Tutorials on accessing public reference and genomic data
  ☆30Updated 4 months ago
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆335Updated last month
• hbctraining / Intro-to-bulk-RNAseq
  Introduction to bulk RNA-seq
  ☆114Updated 2 months ago
• hbctraining / Intro-to-rnaseq-hpc-O2
  This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
  ☆170Updated 4 years ago
• tallulandrews / scRNASeqPipeline
  ☆118Updated 6 years ago
• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆54Updated 6 months ago
• iDEP-SDSU / idep
  Integrated Differential Expression and Pathway analysis
  ☆133Updated last month
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆73Updated 3 months ago
• brandonyph / LiquidBrain_Scripts
  This folder ultimately should contains all my project shown in my Youtube channel.
  ☆37Updated 2 years ago
• tavareshugo / tutorial_DESeq2_contrasts
  ☆62Updated last year
• huayc09 / SeuratExtend
  ☆146Updated last week
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆191Updated this week
• compbiomed / singleCellTK
  Interactively analyze single cell genomic data
  ☆182Updated 2 weeks ago
• dviraran / xCell
  Cell types enrichment analysis
  ☆198Updated last year
• hamidghaedi / Methylation_Analysis
  Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis
  ☆27Updated last year
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆169Updated 2 weeks ago
• PoisonAlien / TCGAmutations
  R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE
  ☆95Updated 9 months ago