BCCHR-trainee-omics-group / StudyGroup
This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.
☆42Updated 9 months ago
Alternatives and similar repositories for StudyGroup:
Users that are interested in StudyGroup are comparing it to the libraries listed below
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆119Updated 4 years ago
- ☆71Updated 3 years ago
- published papers with a lot of data☆66Updated last month
- Tutorials on accessing public reference and genomic data☆31Updated 3 weeks ago
- Updated implementation of the GSEA-P R application for modern R distributions☆95Updated 3 years ago
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆92Updated 8 months ago
- My youtube programming scripts☆52Updated last month
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆91Updated last year
- The package wrapping the book, for deployment via the Bioconductor build system.☆83Updated 4 months ago
- Easily install and load packages from the tidyomcis ecosystem☆64Updated last year
- Code and data repository for the 2020 physalia course on single cell RNA sequencing.☆58Updated 4 years ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆107Updated this week
- An R interface to enrichR☆90Updated last month
- ☆58Updated 10 months ago
- R data package for annotating/converting Gene IDs☆163Updated 2 years ago
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆80Updated this week
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆77Updated 4 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆23Updated 10 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆91Updated 5 months ago
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆89Updated 2 years ago
- RNA-seq workflow: exploratory analysis and differential expression☆75Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆107Updated 7 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆141Updated last month
- DE analysis module for Week3☆66Updated 8 years ago
- ☆61Updated last year
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated 10 months ago
- my notes for scATACseq analysis☆122Updated 10 months ago
- collection of notebooks with different cytoscape workflows☆49Updated last year
- Code for biostar tutorials - mostly R and Perl☆50Updated 7 months ago