counsyl / stor
A cross-compatible CLI and Python API for accessing block and object storage
☆35Updated 4 months ago
Related projects: ⓘ
- CGAT-ruffus is a lightweight python module for running computational pipelines☆173Updated 3 years ago
- Python Scientific Pipeline Management System☆71Updated last year
- Tool to easily start up an IPython cluster on different schedulers.☆148Updated 4 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 4 years ago
- a simple read-only sequence database, designed for short reads☆62Updated 7 months ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 4 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 5 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆102Updated last year
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆26Updated 2 years ago
- Configure workflow/pipeline tests using yaml files.☆63Updated last month
- Deprecated☆100Updated 5 years ago
- Python graph database framework for bioinformatics☆92Updated 2 years ago
- A lightweight parallel task engine☆145Updated 4 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆86Updated 6 years ago
- WDL plugin for pytest☆48Updated last year
- Python wrapper around the C DRMAA library.☆109Updated 5 years ago
- a nose plugin for finding and running IPython notebooks as nose tests☆79Updated 2 years ago
- High throughput, pain-free big data pipelines.☆30Updated 7 years ago
- This is a beginner's tutorial to Snakemake☆70Updated 8 years ago
- A language server for Common Workflow Language☆67Updated 9 months ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆121Updated last year
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 4 years ago
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Updated 7 years ago
- Easily launch cloud applications.☆42Updated last year
- A tool for running bioinformatics workflows locally or in the cloud.☆29Updated 4 years ago
- ☆81Updated this week
- ☆38Updated this week
- Workflow Description Language developer tools & local runner☆172Updated last month
- Easily create and manage compute clusters on any Cloud.☆37Updated 2 years ago