counsyl / stor
A cross-compatible CLI and Python API for accessing block and object storage
☆35Updated 11 months ago
Alternatives and similar repositories for stor:
Users that are interested in stor are comparing it to the libraries listed below
- CGAT-ruffus is a lightweight python module for running computational pipelines☆174Updated 3 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆147Updated 4 years ago
- Python Scientific Pipeline Management System☆71Updated last year
- Create cwl workflows by writing a simple Python script☆40Updated 4 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 4 years ago
- a simple read-only sequence database, designed for short reads☆66Updated last year
- High throughput, pain-free big data pipelines.☆30Updated 8 years ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 5 months ago
- Configure workflow/pipeline tests using yaml files.☆67Updated 8 months ago
- a nose plugin for finding and running IPython notebooks as nose tests☆80Updated 3 years ago
- Parse Illumina sample sheets with Python☆50Updated last year
- A web application to view and share Common Workflow Language workflows☆46Updated this week
- Open source dataflow engine in Django☆35Updated this week
- This is a beginner's tutorial to Snakemake☆70Updated 9 years ago
- Python library that facilitates opening, reading, and writing files (and file-like entities like URLs and streams) agnostic of compressio…☆22Updated 6 months ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 8 months ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆87Updated 7 years ago
- Python graph database framework for bioinformatics☆93Updated 3 years ago
- Deprecated☆100Updated 5 years ago
- WDL plugin for pytest☆48Updated last year
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 5 years ago
- A lightweight parallel task engine