counsyl / storLinks
A cross-compatible CLI and Python API for accessing block and object storage
☆35Updated last year
Alternatives and similar repositories for stor
Users that are interested in stor are comparing it to the libraries listed below
Sorting:
- CGAT-ruffus is a lightweight python module for running computational pipelines☆175Updated 4 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆146Updated 5 years ago
- Configure workflow/pipeline tests using yaml files.☆71Updated last year
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆105Updated 2 years ago
- A lightweight parallel task engine☆148Updated 5 years ago
- Python graph database framework for bioinformatics☆95Updated 4 years ago
- Python Scientific Pipeline Management System☆71Updated 2 years ago
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Updated 8 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- High throughput, pain-free big data pipelines.☆30Updated 8 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆224Updated 5 months ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 6 years ago
- Pilot to work with dynamic visualization by using python☆60Updated 5 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated last year
- Generate Pandas frames, load and extract data, based on JSON Table Schema descriptors.☆52Updated 4 years ago
- a simple read-only sequence database, designed for short reads☆65Updated last year
- A minimalist tree plotting library using toyplot graphs☆183Updated 3 weeks ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- A language server for Common Workflow Language☆66Updated 2 years ago
- Workflow Description Language developer tools & local runner☆202Updated last month
- Variant Caller Analysis Dashboard and Data Management System☆36Updated 9 years ago
- WDL plugin for pytest☆49Updated 2 years ago
- Python library that facilitates opening, reading, and writing files (and file-like entities like URLs and streams) agnostic of compressio…☆23Updated 8 months ago
- Augmented Interval Tree implemented in Cython/C☆20Updated 11 months ago
- Efficient storage of same-type, uneven-size arrays☆12Updated 7 years ago
- Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.☆26Updated 6 years ago
- Easily launch cloud applications.☆42Updated last year
- Deprecated☆100Updated 6 years ago