Alternatives and similar repositories for stor

Users that are interested in stor are comparing it to the libraries listed below

• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 5 years ago
• cgat-developers / ruffus
  CGAT-ruffus is a lightweight python module for running computational pipelines
  ☆174Updated 4 years ago
• LUMC / pytest-workflow
  Configure workflow/pipeline tests using yaml files.
  ☆69Updated last year
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 5 years ago
• roryk / ipython-cluster-helper
  Tool to easily start up an IPython cluster on different schedulers.
  ☆146Updated 5 years ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• Illumina / pyflow
  A lightweight parallel task engine
  ☆148Updated 5 years ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• cjlee112 / pygr
  Python graph database framework for bioinformatics
  ☆93Updated 3 years ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆193Updated 3 weeks ago
• rabix / benten
  A language server for Common Workflow Language
  ☆65Updated last year
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• coelias / Pynteractive
  Pilot to work with dynamic visualization by using python
  ☆60Updated 5 years ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 9 months ago
• kylessmith / ailist
  Augmented Interval Tree implemented in Cython/C
  ☆20Updated 7 months ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 5 years ago
• ga4gh / task-execution-schemas
  ☆91Updated 2 weeks ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated last month
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated last month
• jdidion / xphyle
  Python library that facilitates opening, reading, and writing files (and file-like entities like URLs and streams) agnostic of compressio…
  ☆23Updated 4 months ago
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 6 years ago
• biocore-ntnu / kerneltree
  Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.
  ☆25Updated 6 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆108Updated 6 years ago
• broadinstitute / pywdl
  Python bindings for WDL
  ☆10Updated 7 years ago
• irods / python-irodsclient
  A Python API for iRODS
  ☆70Updated this week
• genialis / resolwe
  Open source dataflow engine in Django
  ☆36Updated 3 weeks ago
• pyranges / ncls
  NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.
  ☆223Updated last month
• sdvillal / jagged
  Efficient storage of same-type, uneven-size arrays
  ☆12Updated 7 years ago