NCI-GDC / gdc-clientLinks
GDC Data Transfer Tool
☆151Updated 4 months ago
Alternatives and similar repositories for gdc-client
Users that are interested in gdc-client are comparing it to the libraries listed below
Sorting:
- Official repository for GDC User Guides in Markdown format☆60Updated 3 weeks ago
- Tool to download/merge RNASeq data from the GDC Portal in matrices identified by TCGA barcode☆36Updated 5 years ago
- A centralized location for storing curated data from cBioPortal☆193Updated last week
- ☆149Updated 9 months ago
- Python packaging for CPTAC data☆107Updated last year
- Programmatic interface to Synapse services for Python☆76Updated this week
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆121Updated 6 years ago
- Python API for Xena Hub☆53Updated 2 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆48Updated last year
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆52Updated 5 years ago
- Scripts to analyze TCGA data☆126Updated last year
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- ☆45Updated last week
- ☆55Updated 2 years ago
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆171Updated 3 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆109Updated last week
- HMS Research Computing User Training☆93Updated last week
- Subpopulation detection in high-dimensional single-cell data☆71Updated 5 years ago
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆119Updated 4 months ago
- MyGene.info: A BioThings API for gene annotations☆128Updated last month
- ☆35Updated last month
- TCGA-Assembler 2☆77Updated 7 years ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆59Updated last week
- Histology Topography Cytometry Analysis Toolbox☆67Updated this week
- Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation☆49Updated 3 years ago
- Image Mass Cytometry analysis pipeline☆26Updated 4 months ago
- Model zoo for genomics☆169Updated last year
- Deep learning based processing of Atac-seq data☆131Updated 2 years ago
- Subpopulation detection in high-dimensional single-cell data☆137Updated 5 years ago
- Python biomart API☆69Updated 2 years ago