Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping
☆14Aug 13, 2021Updated 4 years ago
Alternatives and similar repositories for MultiOmicsIntegrationStudy
Users that are interested in MultiOmicsIntegrationStudy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- HyperTMO: A trusted multi-omics integration framework based on Hypergraph convolutional network for patient classification☆13Apr 1, 2024Updated 2 years ago
- CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping☆10Jun 6, 2020Updated 6 years ago
- ☆10Feb 3, 2020Updated 6 years ago
- Multi-omics integration method using AE and GCN☆42Jul 2, 2026Updated last week
- a deep learning approach for integrative cancer subtyping of multi-omics data☆40May 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Novel joint clustering method with scRNA-seq and CITE-seq data☆10Jun 22, 2021Updated 5 years ago
- ☆18May 5, 2020Updated 6 years ago
- ☆11Apr 1, 2024Updated 2 years ago
- An interpretable deep learning model for cancer classification using high-dimensional omics data☆18Jan 24, 2022Updated 4 years ago
- Multi-task deep learning framework for multi-omics data analysis☆53May 5, 2022Updated 4 years ago
- ☆21Dec 23, 2025Updated 6 months ago
- Implementations in both Matlab and R of the CIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/s…☆19May 19, 2023Updated 3 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 3 months ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆35Jun 30, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Code for the THItoGene☆30Apr 9, 2025Updated last year
- Repository of databases for omic data☆17Jan 9, 2024Updated 2 years ago
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆164May 17, 2022Updated 4 years ago
- ☆28Jan 25, 2022Updated 4 years ago
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.☆26Feb 23, 2022Updated 4 years ago
- ☆66Nov 14, 2023Updated 2 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An attempt to use KAN☆13May 23, 2024Updated 2 years ago
- ☆78Oct 10, 2025Updated 8 months ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated 11 months ago
- COMUNET: a tool to explore and visualize intercellular communication☆12Apr 15, 2020Updated 6 years ago
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- ☆34Jan 18, 2023Updated 3 years ago
- ☆16Feb 11, 2021Updated 5 years ago
- SNE Simulation Dataset Functions☆12Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12Oct 31, 2020Updated 5 years ago
- This is the GitHub repository for paper " Group Equivariant Vision Transformer".☆14Feb 26, 2025Updated last year
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated last year
- Cell type purification by single-cell transcriptome-trained sorting☆16Jul 8, 2019Updated 7 years ago
- ☆14Oct 14, 2022Updated 3 years ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago