Pan-cancer quantitative histopathology analysis using deep learning
☆12Mar 1, 2022Updated 4 years ago
Alternatives and similar repositories for PC-CHiP
Users that are interested in PC-CHiP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Mar 9, 2026Updated 2 weeks ago
- A pan-cancer platform for mutation prediction from routine histology☆69May 23, 2021Updated 4 years ago
- 180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering,…☆18Feb 19, 2026Updated last month
- ☆12Jun 11, 2023Updated 2 years ago
- Codes available of a paper: An Efficient Cervical Whole Slide Image Analysis Framework Based on Multi-scale Semantic and Location Deep Fe…☆16Jul 26, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A utility for previewing Jupyter notebooks with a double click.☆16Jun 1, 2025Updated 9 months ago
- Visualizing the space of chemical reactions with the parametric (learnable) t-SNE.☆16May 5, 2022Updated 3 years ago
- ☆28Jun 24, 2025Updated 9 months ago
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 3 years ago
- Ensemble Learning of Foundation Models☆17Aug 29, 2025Updated 6 months ago
- Fine-grained Image Classification via Pytorch☆27Jul 8, 2021Updated 4 years ago
- This is the pytorch\DGL implementation of the AMIGO paper.☆10Feb 6, 2024Updated 2 years ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Dec 14, 2025Updated 3 months ago
- Complete 3D character generation based on ControlVideo, GroundingDINO, SegmentAnything, InstantNGP, and nvdiffrec☆17Jan 23, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Dec 17, 2020Updated 5 years ago
- A reimplementation of a classical PSMC method in python for educational purposes☆17Jul 22, 2024Updated last year
- MicrOSAtellite Instability Classifier☆15Dec 12, 2017Updated 8 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Chest Xray Classifier using CNNs and Transfer Learning. The jupyter notebook of interest is titled 'Xrays_alt.ipynb'☆11May 18, 2018Updated 7 years ago
- A toolking for cell type hierarchies: marker selection & consistent classification☆22Nov 26, 2023Updated 2 years ago
- ☆12Jun 5, 2024Updated last year
- A GTK coub downloader for Linux☆22May 21, 2024Updated last year
- Predicting breast cancer at 97.51% accuracy with Naive Bayes Classifier for learning purposes.☆13May 1, 2010Updated 15 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- scRNA数据分析中文教程☆11Jul 29, 2019Updated 6 years ago
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 6 years ago
- SelectiOn in PRotein ANnotated regiOns. Adapted dN/dS based method to detect selection in specific protein regions☆11May 2, 2024Updated last year
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆12Jun 24, 2023Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. DescTools — Tools for Descriptive Statistics. Homepage: https://andrisigno…☆11Mar 28, 2025Updated last year
- breast Cancer乳腺癌数据挖掘，python sklearn☆11Apr 13, 2019Updated 6 years ago
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- Chinese Text Generation using LSTM☆11Aug 7, 2017Updated 8 years ago
- Poisson scRNA Integration of Mixed Unknown Signals☆11Oct 7, 2024Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- Differential Mutation Analysis☆11May 24, 2020Updated 5 years ago
- TCGA-Assembler 2☆77Jun 4, 2018Updated 7 years ago
- ☆15Oct 10, 2023Updated 2 years ago