Alternatives and similar repositories for table-testing

Users that are interested in table-testing are comparing it to the libraries listed below

• YosefLab / FastProject
  Dimensionality reduction for single cell RNA-seq data
  ☆36Updated 5 years ago
• HumanCellAtlas / sctools
  Utilities for large scale distributed single cell data processing
  ☆24Updated 3 months ago
• higlass / clodius
  Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
  ☆39Updated 5 months ago
• meuleman / epilogos
  Methods for summarizing and visualizing multi-biosample functional genomic annotations
  ☆46Updated 7 months ago
• JEFworks / ubit2
  User-friendly Bioinformatics Tools
  ☆18Updated 4 years ago
• JEFworks-Lab / MERmaid
  WebGL-based viewer for spatially-resolved transcriptomics data
  ☆28Updated 2 years ago
• czbiohub-sf / cerebra
  A tool for fast and accurate summarizing of variant calling format (VCF) files
  ☆61Updated 2 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 3 months ago
• flo-compbio / xlmhg
  XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.
  ☆13Updated 2 years ago
• HumanCellAtlas / data-consumer-vignettes
  Simple walk-throughs of interacting with the DCP as a downstream data consumer.
  ☆17Updated 3 weeks ago
• SnakeChunks / SnakeChunks
  Modular blocks to build Snakemake workflows for reproducible NGS analyses
  ☆22Updated 6 years ago
• higlass / higlass-python
  Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
  ☆60Updated 2 weeks ago
• linnarsson-lab / loom-viewer
  Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format
  ☆36Updated 9 months ago
• COMBINE-lab / pyroe
  ☆16Updated 9 months ago
• broadinstitute / single_cell_portal
  Tutorials, workflows, and convenience scripts for Single Cell Portal
  ☆50Updated last year
• single-cell-data / SOMA
  A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.
  ☆79Updated 4 months ago
• brentp / bw-python
  python wrapper to dpryan79's bigwig library using cffi
  ☆19Updated 9 years ago
• aidenlab / JuiceboxLegacy
  OLD REPOSITORY - Go to
  ☆31Updated 7 years ago
• pachterlab / kite
  kallisto index tag extractor
  ☆20Updated 6 years ago
• czi-hca-comp-tools / easy-data
  easy access to benchmark datasets
  ☆50Updated 7 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• aboyle / F-seq
  A Feature Density Estimator for High-Throughput Sequence Tags
  ☆22Updated 4 years ago
• pepkit / peppy
  Project metadata manager for PEPs in Python
  ☆38Updated last week
• broadinstitute / scRNA-Seq
  ☆12Updated 2 years ago
• kundajelab / genomedisco
  Software for comparing contact maps from HiC, CaptureC and other 3D genome data.
  ☆27Updated 7 years ago
• theislab / scAnalysisTutorial
  ☆10Updated 8 years ago
• jernst98 / ChromImpute
  ☆16Updated last year
• jackhump / leafviz
  Just the leafviz parts of Leafcutter
  ☆14Updated 2 years ago
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 10 months ago
• greenelab / multi-plier
  An unsupervised transfer learning approach for rare disease transcriptomics
  ☆46Updated 5 years ago