Repository with information about the BioHackathon hosted in Paris in Nov 2018
☆28Jul 6, 2021Updated 4 years ago
Alternatives and similar repositories for BioHackathon
Users that are interested in BioHackathon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆25Jul 6, 2021Updated 4 years ago
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Nov 7, 2022Updated 3 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 3 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Trigger CWL workflows via GA4GH WES and TES☆18Jan 19, 2026Updated 4 months ago
- Web app for visualizing models of small-scale gene regulatory and protein-protein interaction networks.☆17May 29, 2026Updated last week
- Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.☆25Nov 30, 2023Updated 2 years ago
- Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/☆13Apr 6, 2026Updated 2 months ago
- ☆13Aug 14, 2018Updated 7 years ago
- Example of how to use R in Jupyter notebooks and make compatible with Binder☆17Feb 25, 2019Updated 7 years ago
- Code for the data processing pipeline☆17Jun 21, 2021Updated 4 years ago
- X things you should take into consideration if you code for big data analysis☆23May 29, 2018Updated 8 years ago
- Infer metadata for your downstream analysis straight from your RNA-Seq data☆15Nov 20, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used togeth…☆11May 19, 2026Updated 3 weeks ago
- InspectOmop is a lightweight python 3 package that assists in the extraction of electronic health record(EHR) data from relational databa…☆15Apr 14, 2026Updated last month
- Super small biological datasets for unit testing☆62Nov 6, 2019Updated 6 years ago
- Python package aimed at automatic identification of electron and hole transfer pathways in proteins.☆12Feb 17, 2026Updated 3 months ago
- ☆13Feb 16, 2019Updated 7 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Oct 9, 2019Updated 6 years ago
- R packaged for Alpine Linux☆10Dec 10, 2017Updated 8 years ago
- For BioHackathon Europe 2021.☆30Nov 18, 2022Updated 3 years ago
- Output FASTQ summary statistics in JSON format☆29Oct 30, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Classify web visitor queries so you can chart, and respond to, trends in information seeking☆14Sep 7, 2023Updated 2 years ago
- Code for 'Teaching with Interactive Data Visualization' site☆22May 6, 2015Updated 11 years ago
- ☆13Mar 25, 2026Updated 2 months ago
- The source code for the new version of the EMBL-EBI BioSamples database☆16Apr 16, 2026Updated last month
- Extra tools to work with the Luigi library☆11Jun 1, 2026Updated last week
- Create and Query a Local Copy of GenBank in R☆27Mar 6, 2025Updated last year
- Examples and demos for ReproZip☆17Oct 24, 2022Updated 3 years ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- CWL experimental grammar☆11Nov 16, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Mar 4, 2026Updated 3 months ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- High-reproducibility CWL runner powered by Guix☆23May 30, 2026Updated last week
- Yet another LLM command line interface☆16Dec 9, 2024Updated last year
- Build and maintain multiple custom conda environments all in one place.☆40Dec 3, 2024Updated last year
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago