A tool to infer metagenomic sample composition
☆20Oct 10, 2023Updated 2 years ago
Alternatives and similar repositories for falcon
Users that are interested in falcon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reconstruction and analysis of viral and host genomes at multi-organ level☆21Apr 10, 2026Updated 4 months ago
- A tool to find and visualize rearrangements in DNA sequences☆16Sep 16, 2019Updated 6 years ago
- A secure encryption tool for genomic data☆64May 3, 2026Updated 4 months ago
- A genomics-proteomics toolkit☆47Oct 18, 2023Updated 2 years ago
- A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.☆17Apr 13, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆14Nov 17, 2025Updated 9 months ago
- Extracting Patients' information from clinical notes and export them to an OMOP CDM database.☆28Jul 14, 2021Updated 5 years ago
- Gameboy emulator in go☆25Apr 21, 2017Updated 9 years ago
- Test HTTP servers for robustness to arbitrary requests☆17Jun 13, 2023Updated 3 years ago
- An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing☆11Aug 28, 2026Updated last week
- ☆12Feb 14, 2023Updated 3 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- Add new taxa or taxonomic groups to the NCBI Taxdump files☆20Mar 9, 2020Updated 6 years ago
- Workflow Management for Biomedical exploration☆30Nov 8, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- gargammel is an ancient DNA simulator☆39Aug 18, 2026Updated 2 weeks ago
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Feb 5, 2025Updated last year
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16May 29, 2024Updated 2 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 3 months ago
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 6 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Dec 5, 2018Updated 7 years ago
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆15Jun 14, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Execute pipelines and other workflows of docker containers.☆11Oct 1, 2016Updated 9 years ago
- ☆22Jun 10, 2024Updated 2 years ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago
- A collection of DICOM files for testing☆33Mar 1, 2026Updated 6 months ago
- List of awesome projects made by MIECT ( MSc in Computer and Telematics Engineering at the University of Aveiro ) students!☆32Jun 28, 2018Updated 8 years ago
- Python library for talking to Apollo API☆10Jan 31, 2024Updated 2 years ago
- Fastq compression tool☆17Dec 2, 2019Updated 6 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 9 months ago
- k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets☆23Nov 18, 2018Updated 7 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Apr 27, 2018Updated 8 years ago
- extract SV signal from a BAM☆10Jul 26, 2018Updated 8 years ago
- The esa-matchfinder is a C99 library for efficient Lempel-Ziv factorization using enhanced suffix array (ESA).☆28Sep 2, 2025Updated last year
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago