A tool to infer metagenomic sample composition
☆20Oct 10, 2023Updated 2 years ago
Alternatives and similar repositories for falcon
Users that are interested in falcon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reconstruction and analysis of viral and host genomes at multi-organ level☆21Apr 10, 2026Updated 4 months ago
- A tool to find and visualize rearrangements in DNA sequences☆16Sep 16, 2019Updated 6 years ago
- A secure encryption tool for genomic data☆64May 3, 2026Updated 3 months ago
- A genomics-proteomics toolkit☆47Oct 18, 2023Updated 2 years ago
- This is a Dicoogle plugin to support the storage of files over IPFS.☆15Nov 27, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Everyday is a new sensation... What's the sensation for today? ✨✨☆11Feb 14, 2023Updated 3 years ago
- ☆14Nov 17, 2025Updated 8 months ago
- Extracting Patients' information from clinical notes and export them to an OMOP CDM database.☆28Jul 14, 2021Updated 5 years ago
- An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing☆11Mar 16, 2026Updated 4 months ago
- ☆12Feb 14, 2023Updated 3 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- Add new taxa or taxonomic groups to the NCBI Taxdump files☆20Mar 9, 2020Updated 6 years ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- gargammel is an ancient DNA simulator☆39Aug 6, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Feb 5, 2025Updated last year
- DeepWAS: Directly integrating regulatory information into GWAS using machine learning☆18Mar 14, 2019Updated 7 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16May 29, 2024Updated 2 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 2 months ago
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 6 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Dec 5, 2018Updated 7 years ago
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 4 years ago
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆15Jun 14, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆22Jun 10, 2024Updated 2 years ago
- Execute pipelines and other workflows of docker containers.☆11Oct 1, 2016Updated 9 years ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- A collection of DICOM files for testing☆33Mar 1, 2026Updated 5 months ago
- List of awesome projects made by MIECT ( MSc in Computer and Telematics Engineering at the University of Aveiro ) students!☆32Jun 28, 2018Updated 8 years ago
- Python library for talking to Apollo API☆10Jan 31, 2024Updated 2 years ago
- Fastq compression tool☆17Dec 2, 2019Updated 6 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets☆23Nov 18, 2018Updated 7 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Apr 27, 2018Updated 8 years ago
- extract SV signal from a BAM☆10Jul 26, 2018Updated 8 years ago
- The esa-matchfinder is a C99 library for efficient Lempel-Ziv factorization using enhanced suffix array (ESA).☆28Sep 2, 2025Updated 11 months ago
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago
- Generate mutated sequence files from a reference genome.☆11Jun 12, 2026Updated 2 months ago