cobilab / falconLinks
A tool to infer metagenomic sample composition
☆21Updated last year
Alternatives and similar repositories for falcon
Users that are interested in falcon are comparing it to the libraries listed below
Sorting:
- A genomics-proteomics toolkit☆46Updated last year
- Reconstruction and analysis of viral and host genomes at multi-organ level☆22Updated 8 months ago
- Find and visualize rearrangements in DNA sequences☆55Updated last year
- ☆9Updated 7 years ago
- Perform microbiome-wide association studies with a variety of models☆17Updated 8 years ago
- ☆16Updated 7 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Highly sensitive pathogen detection☆12Updated 4 years ago
- Documentation for analyzing SARS-Cov2 samples.☆11Updated 5 years ago
- Assembly and intrahost / low-frequency variant calling for viral samples☆14Updated 5 years ago
- A Shotgun Metagenome Annotation Pipeline☆23Updated 8 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- Analyze a set of genomes with the anvi'o pangenome pipeline☆17Updated last year
- A utility for splitting mixed origin NGS reads☆10Updated 4 years ago
- Genomic Assemblies Merger for NGS☆26Updated last year
- reference free variant assembly☆33Updated last year
- A tool to find and visualize rearrangements in DNA sequences☆16Updated 5 years ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆14Updated last year
- Simulome, genome and mutant variant simulator.☆10Updated 4 years ago
- Real-time species-typing visualisation for nanopore data.☆13Updated 2 years ago
- Accurate, resource-frugal and deterministic DNA sequence classifier.☆34Updated last month
- ☆14Updated 6 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- Lightweight C++ library for reading FASTA and FASTQ files.☆11Updated 6 years ago
- smallgenomeutilities is a collection of Python scripts to convert alignments between different reference genomes.☆11Updated last week
- Contains a set of Galaxy Tools mostly written by the Bioinformatics core at NML☆16Updated 3 months ago
- Benchmark MinION assembler pipelines and publish your results in a heartbeat!☆15Updated 5 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 5 months ago
- Test data for MultiQC.☆22Updated last week