A tool to infer metagenomic sample composition
☆20Oct 10, 2023Updated 2 years ago
Alternatives and similar repositories for falcon
Users that are interested in falcon are comparing it to the libraries listed below
Sorting:
- Reconstruction and analysis of viral and host genomes at multi-organ level☆21Jul 3, 2025Updated 8 months ago
- This is a Dicoogle plugin to support the storage of files over IPFS.☆14Nov 27, 2023Updated 2 years ago
- A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.☆17Apr 13, 2022Updated 3 years ago
- ☆14Nov 17, 2025Updated 3 months ago
- A genomics-proteomics toolkit☆47Oct 18, 2023Updated 2 years ago
- A secure encryption tool for genomic data☆62Apr 14, 2024Updated last year
- A tool to find and visualize rearrangements in DNA sequences☆16Sep 16, 2019Updated 6 years ago
- Extracting Patients' information from clinical notes and export them to an OMOP CDM database.☆27Jul 14, 2021Updated 4 years ago
- Add new taxa or taxonomic groups to the NCBI Taxdump files☆20Mar 9, 2020Updated 5 years ago
- An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing☆11Updated this week
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 5 years ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated 8 months ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆13Jun 12, 2024Updated last year
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 5 years ago
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Feb 5, 2025Updated last year
- Test HTTP servers for robustness to arbitrary requests☆17Jun 13, 2023Updated 2 years ago
- Real-time species-typing visualisation for nanopore data.☆13Apr 11, 2023Updated 2 years ago
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆14Jun 14, 2022Updated 3 years ago
- An efficient DNA sequence compressor using Neural Networks☆15Jan 25, 2023Updated 3 years ago
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 3 years ago
- Merging CodeCheck checker and Play server☆17May 16, 2025Updated 9 months ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Dec 5, 2018Updated 7 years ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16May 29, 2024Updated last year
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 3 months ago
- A collection of DICOM files for testing☆27Updated this week
- ☆20Jun 10, 2024Updated last year
- Systematic ProtEin AnnotatoR☆19Sep 20, 2025Updated 5 months ago
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets☆23Nov 18, 2018Updated 7 years ago
- Python programming workshop for bioinformatics☆10Jul 13, 2021Updated 4 years ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- Harmonization of AMR predictor tool outputs☆25Jan 14, 2025Updated last year
- gargammel is an ancient DNA simulator☆38Jul 22, 2024Updated last year
- ☆25Feb 2, 2021Updated 5 years ago
- WolfPACS is an DICOM load balancer written in Erlang.☆13Feb 1, 2026Updated last month
- Stupid web application that checks if the food at my university's canteens is good.☆30Dec 20, 2025Updated 2 months ago
- ☆10May 14, 2025Updated 9 months ago
- ⭕️💰 Network monitoring solution to detect crypto-mining on local machines.☆31Jun 27, 2018Updated 7 years ago