cobilab / falcon
A tool to infer metagenomic sample composition
☆21Updated last year
Alternatives and similar repositories for falcon:
Users that are interested in falcon are comparing it to the libraries listed below
- Reconstruction and analysis of viral and host genomes at multi-organ level☆22Updated 3 months ago
- Find and visualize rearrangements in DNA sequences☆55Updated 9 months ago
- A genomics-proteomics toolkit☆46Updated last year
- Real-time species-typing visualisation for nanopore data.☆13Updated last year
- A secure encryption tool for genomic data☆56Updated 9 months ago
- Mapping NCBI Genbank accession to GTDB accession☆14Updated 3 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra …☆14Updated 10 months ago
- reference free variant assembly☆32Updated last year
- blast, shmlast☆21Updated 4 years ago
- Experiments with using BIGSI data structure for metagenomic and QC applications☆18Updated 5 months ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- A utility for splitting mixed origin NGS reads☆10Updated 3 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago
- repo for 2016 EDAMAME tutorials☆11Updated 8 years ago
- PhylOTU identifies microbial OTUs from metagenomic data☆24Updated 11 years ago
- A message queue for genomic surveillance☆20Updated 3 years ago
- Indel-aware consensus for aligned BAM☆21Updated last month
- Malleable All-seeing Journal Of Research Artifacts☆36Updated last year
- (Obsolete) NCBI Prokaryotic Genome Annotation Pipeline. New site:☆15Updated 6 years ago
- Compare assembly graph file formats☆15Updated 9 years ago
- Genomic Assemblies Merger for NGS☆26Updated last year
- ☆18Updated 2 years ago
- ☆16Updated 5 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- ☆11Updated 3 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆14Updated 7 months ago
- ☆14Updated 8 years ago
- ☆16Updated 6 years ago
- multi-tool QC for minion data☆10Updated 6 years ago