haddocking / haddock3Links
Official repo of the modular BioExcel version of HADDOCK
☆172Updated this week
Alternatives and similar repositories for haddock3
Users that are interested in haddock3 are comparing it to the libraries listed below
Sorting:
- ☆120Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆219Updated 2 weeks ago
- Predict the binding affinity of protein-protein complexes from structural data☆142Updated 3 months ago
- Code for ColabDock paper☆142Updated 3 months ago
- ☆134Updated 3 weeks ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆115Updated last year
- Predict the structure of immune receptor proteins☆148Updated 6 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆159Updated last week
- Rifdock Library for Conformational Search☆160Updated last year
- Let LLM run your MDs.☆219Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆181Updated 5 months ago
- Protein-ligand structure prediction☆222Updated this week
- Convenience Python APIs for antibody numbering using ANARCI☆102Updated 2 months ago
- Application to assign secondary structure to proteins☆204Updated last month
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆139Updated last year
- Antibody Numbering and Antigen Receptor ClassIfication☆228Updated last year
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆198Updated 2 months ago
- ☆168Updated 3 years ago
- Protein folding in Pymol☆109Updated 6 months ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆311Updated 6 months ago
- Masif seed paper repository☆156Updated 2 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆136Updated last month
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆146Updated 4 months ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆332Updated last month
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆202Updated last month
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆255Updated 3 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆154Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆154Updated 3 months ago
- Accurately speed up AutoDock Vina☆153Updated last year