gerdos / PyRAMALinks
Python implementation of the Ramachandran plot
☆53Updated 5 months ago
Alternatives and similar repositories for PyRAMA
Users that are interested in PyRAMA are comparing it to the libraries listed below
Sorting:
- Set of useful HADDOCK utility scripts☆57Updated 4 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 2 weeks ago
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆83Updated 10 months ago
- Create DSSP and HSSP files☆94Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆44Updated 3 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆68Updated 7 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆37Updated 3 years ago
- Contact map alignment☆42Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago
- Framework for the rapid modeling glycans and glycoproteins.☆31Updated 2 years ago
- Calculation of interatomic interactions in molecular structures☆83Updated 4 years ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆78Updated 9 months ago
- Predict the binding affinity of protein-protein complexes from structural data☆167Updated 3 months ago
- Software for biomolecular electrostatics and solvation calculations☆122Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆61Updated 9 months ago
- PyDock Tutorial☆35Updated 7 years ago
- A simple Python library to generate model peptides☆91Updated 5 years ago
- AutoDock CrankPep for peptide and disordered protein docking☆55Updated 2 months ago
- The DSSP building software☆48Updated 2 years ago
- Pymol ScrIpt COllection (PSICO)☆64Updated 3 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆43Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆56Updated 5 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆118Updated last year
- ☆55Updated 5 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆86Updated 2 months ago
- Python interface for the RCSB PDB search API.☆65Updated 9 months ago
- Interactive Python notebooks for PDBe API training☆58Updated last week