RashmiKumari / g_mmpbsaLinks
MM-PBSA method for GROMACS. For full description, please visit homepage:
☆67Updated 2 months ago
Alternatives and similar repositories for g_mmpbsa
Users that are interested in g_mmpbsa are comparing it to the libraries listed below
Sorting:
- Calculation of interatomic interactions in molecular structures☆77Updated 3 years ago
- Trusted force field files for gromacs☆56Updated 9 months ago
- Software for biomolecular electrostatics and solvation calculations☆106Updated 11 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆71Updated 4 months ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆27Updated this week
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆124Updated 2 years ago
- A simple Python library to generate model peptides☆87Updated 4 years ago
- AutoDock CrankPep for peptide and disordered protein docking☆51Updated 4 years ago
- (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina☆70Updated 2 years ago
- Modeling with limited data☆59Updated 3 weeks ago
- A Consensus Docking Plugin for PyMOL☆75Updated last year
- Calculation of interatomic interactions in molecular structures☆104Updated 11 months ago
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆64Updated 4 years ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆34Updated 3 weeks ago
- Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…☆59Updated last week
- VirtualFlow for Ligand Preparation☆59Updated 3 months ago
- The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…☆80Updated last year
- A Tool to process and visualize the results of molecular dynamics simulations(GROMACS).☆78Updated 11 months ago
- ☆124Updated 6 years ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆52Updated this week
- Tool suite for analysing molecular dynamics trajectories using network analysis and PRS☆48Updated 2 months ago
- FreeSASA Python Module☆55Updated this week
- Simple protein-ligand complex simulation with OpenMM☆86Updated last year
- Protein and nucleic acid validation service☆83Updated last year
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆44Updated last year
- An automatic workflow to perform MM/GB(PB)SA calculations from force field building, and structure optimization to free energy calculatio…☆112Updated 9 months ago
- ☆45Updated 3 months ago
- Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina☆50Updated last month
- Material from papers from KULL centre☆69Updated last year