Alternatives and similar repositories for haddock-tools:

Users that are interested in haddock-tools are comparing it to the libraries listed below

• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆26Updated 3 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆40Updated 2 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆30Updated 5 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• dina-lab3D / CombFold
  ☆80Updated 5 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• JoaoRodrigues / pdb-tools
  Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.
  ☆26Updated 2 years ago
• PyMOL-Ross / Pymol-Tutorials
  ☆28Updated 3 years ago
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆65Updated 5 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 3 months ago
• lcbc-epfl / metal-site-prediction
  ☆38Updated last year
• Kortemme-Lab / flex_ddG_tutorial
  ☆101Updated 2 years ago
• abeebyekeen / CHAPERONg
  CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses
  ☆43Updated 2 months ago
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆29Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 6 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆49Updated 2 months ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆118Updated 5 months ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆130Updated this week
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆34Updated 2 years ago
• ncbi / SSDraw
  ☆84Updated last year
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆94Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆51Updated 4 months ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆87Updated 7 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 11 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆72Updated last week
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆16Updated this week
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆41Updated 7 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆27Updated 9 months ago