haddocking / haddock-toolsLinks
Set of useful HADDOCK utility scripts
☆53Updated 10 months ago
Alternatives and similar repositories for haddock-tools
Users that are interested in haddock-tools are comparing it to the libraries listed below
Sorting:
- ☆50Updated 3 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆42Updated 2 years ago
- RosettaDesign using PyRosetta☆31Updated 5 years ago
- PyDock Tutorial☆32Updated 7 years ago
- AlphaFold-initiated replica exchange protein docking☆83Updated last month
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆28Updated last week
- Predict the binding affinity of protein-protein complexes from structural data☆138Updated 3 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 7 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆70Updated 3 months ago
- ☆85Updated last year
- The DSSP building software☆44Updated last year
- Python implementation of the Ramachandran plot☆48Updated 5 years ago
- Interactive Python notebooks for PDBe API training☆55Updated 3 weeks ago
- ☆31Updated 4 years ago
- ☆84Updated 9 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 3 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆89Updated last year
- Analysis of alphafold and colabfold results☆30Updated this week
- Efficient manipulation of protein structures in Python☆55Updated 8 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆101Updated 2 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆26Updated 4 months ago
- Framework for the rapid modeling glycans and glycoproteins.☆30Updated last year
- ☆39Updated last year
- ☆48Updated 7 months ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆49Updated 6 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆23Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- Python interface for the RCSB PDB search API.☆64Updated 3 months ago