haddocking / haddock-toolsLinks
Set of useful HADDOCK utility scripts
☆53Updated 11 months ago
Alternatives and similar repositories for haddock-tools
Users that are interested in haddock-tools are comparing it to the libraries listed below
Sorting:
- ☆51Updated 2 weeks ago
- Predict the binding affinity of protein-protein complexes from structural data☆144Updated this week
- RosettaDesign using PyRosetta☆32Updated 6 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- PyDock Tutorial☆33Updated 7 years ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 2 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated last month
- ☆46Updated 7 months ago
- ☆39Updated last year
- Interactive Python notebooks for PDBe API training☆55Updated 2 months ago
- Python implementation of the Ramachandran plot☆51Updated last month
- ☆85Updated 11 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- The DSSP building software☆47Updated 2 years ago
- Framework for the rapid modeling glycans and glycoproteins.☆30Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆104Updated 3 months ago
- ☆85Updated last year
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆72Updated 4 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 3 years ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆22Updated 4 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- Analysis of alphafold and colabfold results☆31Updated last month
- Direct coupling analysis software for protein and RNA sequences☆52Updated last month
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Efficient manipulation of protein structures in Python☆55Updated 9 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆108Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated last year