haddocking / haddock-toolsLinks
Set of useful HADDOCK utility scripts
☆55Updated last month
Alternatives and similar repositories for haddock-tools
Users that are interested in haddock-tools are comparing it to the libraries listed below
Sorting:
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- ☆53Updated 2 months ago
- PyDock Tutorial☆34Updated 7 years ago
- Interactive Python notebooks for PDBe API training☆57Updated last month
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆108Updated 3 weeks ago
- RosettaDesign using PyRosetta☆32Updated 6 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 3 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 4 months ago
- Predict the binding affinity of protein-protein complexes from structural data☆149Updated 3 weeks ago
- Python package to manage protein structures and their annotations☆44Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆114Updated last year
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- The DSSP building software☆47Updated 2 years ago
- ☆87Updated last year
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆74Updated 6 months ago
- Protein Structure Analysis☆63Updated 3 weeks ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Updated 4 years ago
- pyFoldX: python bindings for FoldX.☆50Updated 4 years ago
- ☆47Updated 9 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 3 years ago
- Analysis of alphafold and colabfold results☆32Updated last month
- Python interface for the RCSB PDB search API.☆65Updated 7 months ago
- ☆84Updated this week
- Python implementation of the Ramachandran plot☆52Updated 3 months ago
- ☆41Updated last year
- Framework for the rapid modeling glycans and glycoproteins.☆31Updated 2 years ago