Alternatives and similar repositories for dssp:

Users that are interested in dssp are comparing it to the libraries listed below

• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆268Updated 2 months ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆135Updated this week
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆137Updated 5 months ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆304Updated 2 weeks ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆111Updated last year
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆133Updated 2 months ago
• forlilab / Meeko
  Interface for AutoDock, molecule parameterization
  ☆245Updated this week
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆213Updated 8 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆152Updated 10 months ago
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆176Updated 5 years ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆153Updated last month
• guyujun / pyrosetta-basic
  ☆158Updated 3 years ago
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆158Updated 2 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆256Updated 2 years ago
• ikalvet / heme_binder_diffusion
  ☆119Updated 6 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆108Updated 2 months ago
• Valdes-Tresanco-MS / gmx_MMPBSA
  gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.
  ☆252Updated last month
• Kortemme-Lab / flex_ddG_tutorial
  ☆107Updated 2 years ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆288Updated 11 months ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆132Updated 10 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆209Updated 10 months ago
• uw-ipd / RoseTTAFold2
  ☆190Updated 4 months ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆133Updated 2 months ago
• CAODH / SurfDock
  SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction
  ☆167Updated 3 weeks ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆337Updated 7 months ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆122Updated 6 months ago
• DeltaGroupNJUPT / Vina-GPU-2.0
  Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.
  ☆100Updated last year
• jertubiana / ScanNet
  ☆124Updated last year
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆172Updated this week