PDB-REDO / dsspLinks
Application to assign secondary structure to proteins
☆228Updated last week
Alternatives and similar repositories for dssp
Users that are interested in dssp are comparing it to the libraries listed below
Sorting:
- Official repo of the modular BioExcel version of HADDOCK☆211Updated last week
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆345Updated last month
- Rifdock Library for Conformational Search☆165Updated last year
- Antibody Numbering and Antigen Receptor ClassIfication☆250Updated last year
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆366Updated 2 months ago
- In silico directed evolution of peptide binders with AlphaFold☆248Updated 3 weeks ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆323Updated last year
- Predict the structure of immune receptor proteins☆166Updated 3 weeks ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆213Updated 6 months ago
- Code for ColabDock paper☆149Updated 7 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆124Updated 2 years ago
- Protein-ligand structure prediction☆235Updated 4 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆167Updated 2 months ago
- Protein hallucination and inpainting with RoseTTAFold☆274Updated 2 years ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆166Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆165Updated 7 months ago
- ☆203Updated 7 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆213Updated 4 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆109Updated 6 months ago
- ☆134Updated 3 years ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆164Updated 8 months ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆180Updated 6 years ago
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆314Updated 2 months ago
- ☆176Updated 4 years ago
- Interface for AutoDock, molecule parameterization☆313Updated this week
- Efficient evolution from protein language models☆217Updated 2 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆158Updated 2 months ago
- Protein folding in Pymol☆127Updated 2 weeks ago
- ☆392Updated last month
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…☆419Updated last year