Application to assign secondary structure to proteins
☆275Aug 12, 2026Updated last month
Alternatives and similar repositories for dssp
Users that are interested in dssp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The DSSP building software☆51Aug 7, 2023Updated 3 years ago
- Library containing code to manipulate mmCIF and PDB files☆43Sep 29, 2026Updated last week
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆106Jun 9, 2025Updated last year
- Create DSSP and HSSP files☆95Jul 18, 2024Updated 2 years ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,304Sep 9, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- C-library for calculating Solvent Accessible Surface Areas☆208May 31, 2026Updated 4 months ago
- Protein hallucination and inpainting with RoseTTAFold☆286Mar 30, 2023Updated 3 years ago
- A dependency-free cross-platform swiss army knife for PDB files.☆458Jun 10, 2026Updated 4 months ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆431Feb 26, 2026Updated 7 months ago
- Code for the ProteinMPNN paper☆1,873Aug 14, 2024Updated 2 years ago
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated last year
- PDBFixer fixes problems in PDB files☆677Mar 10, 2026Updated 7 months ago
- OmegaFold Release Code☆627Dec 12, 2022Updated 3 years ago
- Making Protein Design accessible to all via Google Colab!☆947Aug 28, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protein-ligand structure prediction☆241Jul 31, 2025Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆547Mar 22, 2026Updated 6 months ago
- Protein design and variant prediction using autoregressive generative models☆124Jan 23, 2024Updated 2 years ago
- Antibody Numbering and Antigen Receptor ClassIfication☆298May 21, 2024Updated 2 years ago
- ☆214Apr 21, 2025Updated last year
- A package to predict protein inter-residue geometries from sequence data☆222Sep 27, 2021Updated 5 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,436Dec 16, 2025Updated 9 months ago
- ☆35Dec 15, 2023Updated 2 years ago
- A comprehensive library for computational molecular biology☆975Sep 24, 2026Updated 2 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆71Apr 2, 2025Updated last year
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆409Sep 6, 2026Updated last month
- Public RFDiffusionAA repo☆489Jul 9, 2024Updated 2 years ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 3 years ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,325May 22, 2025Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆191Updated this week
- Collection of interaction and molecule parameters for the Martini3 force-field☆23Feb 7, 2023Updated 3 years ago
- A Python Package for Protein Dynamics Analysis☆558Oct 4, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,167Feb 7, 2024Updated 2 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆13Feb 16, 2020Updated 6 years ago
- ☆27Feb 10, 2024Updated 2 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆381Jun 3, 2024Updated 2 years ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆395Jul 31, 2026Updated 2 months ago
- Graph Network for protein-protein interface☆122Mar 22, 2024Updated 2 years ago