Application to assign secondary structure to proteins
☆265Jun 23, 2026Updated last week
Alternatives and similar repositories for dssp
Users that are interested in dssp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The DSSP building software☆51Aug 7, 2023Updated 2 years ago
- Library containing code to manipulate mmCIF and PDB files☆43Jun 23, 2026Updated last week
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆104Jun 9, 2025Updated last year
- Create DSSP and HSSP files☆95Jul 18, 2024Updated last year
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,255May 13, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Potts model-based protein sequence design☆106May 14, 2026Updated last month
- Protein hallucination and inpainting with RoseTTAFold☆284Mar 30, 2023Updated 3 years ago
- A dependency-free cross-platform swiss army knife for PDB files.☆456Jun 10, 2026Updated 3 weeks ago
- C-library for calculating Solvent Accessible Surface Areas☆195May 31, 2026Updated last month
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆410Feb 26, 2026Updated 4 months ago
- Code for the ProteinMPNN paper☆1,778Aug 14, 2024Updated last year
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 11 months ago
- PDBFixer fixes problems in PDB files☆659Mar 10, 2026Updated 3 months ago
- Making Protein Design accessible to all via Google Colab!☆921Apr 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- OmegaFold Release Code☆623Dec 12, 2022Updated 3 years ago
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 11 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆530Mar 22, 2026Updated 3 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆258Mar 26, 2026Updated 3 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆68Apr 2, 2025Updated last year
- ☆212Apr 21, 2025Updated last year
- Antibody Numbering and Antigen Receptor ClassIfication☆277May 21, 2024Updated 2 years ago
- Protein design and variant prediction using autoregressive generative models☆122Jan 23, 2024Updated 2 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,391Dec 16, 2025Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A package to predict protein inter-residue geometries from sequence data☆222Sep 27, 2021Updated 4 years ago
- A comprehensive library for computational molecular biology☆959Updated this week
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,314May 22, 2025Updated last year
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆400Sep 16, 2025Updated 9 months ago
- Collection of interaction and molecule parameters for the Martini3 force-field☆21Feb 7, 2023Updated 3 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆183Jun 11, 2026Updated 3 weeks ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- ☆35Dec 15, 2023Updated 2 years ago
- A Python Package for Protein Dynamics Analysis☆549Jun 22, 2026Updated last week
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,140Feb 7, 2024Updated 2 years ago
- ☆27Feb 10, 2024Updated 2 years ago
- Graph Network for protein-protein interface☆122Mar 22, 2024Updated 2 years ago