Alternatives and similar repositories for freesasa:

Users that are interested in freesasa are comparing it to the libraries listed below

• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated 8 months ago
• Electrostatics / pdb2pqr
  PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.
  ☆135Updated last month
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆174Updated 5 years ago
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆80Updated 4 years ago
• maccallumlab / meld
  Modeling with limited data
  ☆56Updated 2 months ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆97Updated 4 months ago
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆70Updated 3 years ago
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆68Updated 10 months ago
• forlilab / Meeko
  Interface for AutoDock, molecule parameterization
  ☆219Updated this week
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆144Updated 4 months ago
• MooersLab / pymolshortcuts
  The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…
  ☆73Updated 8 months ago
• KULL-Centre / papers
  Material from papers from KULL centre
  ☆67Updated 8 months ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆124Updated this week
• tdudgeon / simple-simulate-complex
  Simple protein-ligand complex simulation with OpenMM
  ☆74Updated last year
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆93Updated last year
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆83Updated 4 months ago
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆104Updated last year
• volkamerlab / opencadd
  A Python library for structural cheminformatics
  ☆93Updated 11 months ago
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆111Updated 7 months ago
• rlabduke / reduce
  Reduce - tool for adding and correcting hydrogens in PDB files
  ☆130Updated 2 months ago
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆176Updated last week
• cmbi / hssp
  Create DSSP and HSSP files
  ☆86Updated 6 months ago
• jensengroup / propka
  PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.
  ☆276Updated 11 months ago
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆63Updated last year
• DeltaGroupNJUPT / Vina-GPU-2.0
  Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.
  ☆97Updated last year
• ncbi / SSDraw
  ☆82Updated 11 months ago
• freesasa / freesasa-python
  FreeSASA Python Module
  ☆48Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆50Updated 4 months ago
• Valdes-Tresanco-MS / gmx_MMPBSA
  gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.
  ☆236Updated last week
• deGrootLab / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆139Updated last month