C-library for calculating Solvent Accessible Surface Areas
☆200May 31, 2026Updated last month
Alternatives and similar repositories for freesasa
Users that are interested in freesasa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FreeSASA Python Module☆61May 31, 2026Updated last month
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆367Jul 14, 2026Updated last week
- PDBFixer fixes problems in PDB files☆666Mar 10, 2026Updated 4 months ago
- A dependency-free cross-platform swiss army knife for PDB files.☆457Jun 10, 2026Updated last month
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆403Jul 14, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Python API for the RCSB Protein Data Bank (PDB)☆335Jun 22, 2026Updated last month
- A Python Package for Protein Dynamics Analysis☆554Updated this week
- DeeplyTough: Learning Structural Comparison of Protein Binding Sites☆167Apr 7, 2023Updated 3 years ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆179Oct 10, 2019Updated 6 years ago
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago
- A high performance drop-in replacement for Biotite's PDBFile.☆43Jun 21, 2026Updated last month
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Jun 18, 2021Updated 5 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆47May 22, 2025Updated last year
- MoleculeKit: Your favorite molecule manipulation kit☆237Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆121Updated this week
- Application to assign secondary structure to proteins☆266Jun 23, 2026Updated last month
- Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake,…☆704Jul 3, 2026Updated 3 weeks ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆36Jul 28, 2022Updated 3 years ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- Python implementation of the multistate Bennett acceptance ratio (MBAR)☆310Feb 12, 2026Updated 5 months ago
- Analysis of non-covalent interactions in MD trajectories☆69Jan 3, 2025Updated last year
- PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.☆173Apr 26, 2026Updated 3 months ago
- Reduce - tool for adding and correcting hydrogens in PDB files☆183Jan 5, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- HTMD: Programming Environment for Molecular Discovery☆275Jul 16, 2026Updated last week
- An open library for the analysis of molecular dynamics trajectories☆724Updated this week
- OmegaFold Release Code☆624Dec 12, 2022Updated 3 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆192Oct 3, 2025Updated 9 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆101Jul 29, 2024Updated last year
- The Binding Affinity Tool (BAT.py) is a fully automated tool for absolute binding free energy (ABFE) and relative binding free energy (RB…☆226Mar 4, 2026Updated 4 months ago
- Working with molecular structures in pandas DataFrames☆756May 22, 2026Updated 2 months ago
- ☆30Apr 2, 2026Updated 3 months ago
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…☆491Mar 9, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆56May 2, 2022Updated 4 years ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆445Jul 5, 2026Updated 2 weeks ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆41May 6, 2026Updated 2 months ago
- Free Parametrization for Small Molecules☆66Jun 30, 2026Updated 3 weeks ago
- Mirror of https://codeberg.org/rvhonorato/gdock >> development happens on Codeberg☆20Jul 7, 2026Updated 2 weeks ago
- Protein design and variant prediction using autoregressive generative models☆122Jan 23, 2024Updated 2 years ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆417Feb 26, 2026Updated 5 months ago