kekegg / DLEPSLinks
A Deep Learning based Efficacy Prediction System for drug discovery
β70Updated 2 years ago
Alternatives and similar repositories for DLEPS
Users that are interested in DLEPS are comparing it to the libraries listed below
Sorting:
- A visible neural network model for drug response predictionβ148Updated last year
- π [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potentialβ19Updated last week
- NetTCR-2.0. Sequence-based prediction of peptide-TCR bindingβ35Updated 3 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigenβ84Updated 3 years ago
- CMap Notebooks for LINCS 2020 Workshopβ46Updated 3 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbβ¦β56Updated 8 months ago
- Functional Embedding of Gene Signaturesβ46Updated last year
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/toolsβ133Updated 3 years ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Dataβ120Updated 2 months ago
- HLA-II ligand predictor.β44Updated 2 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbationβ44Updated last month
- Large language modeling applied to T-cell receptor (TCR) sequences.β56Updated 3 years ago
- Deep Learning Method to Identify Cancer Associated TCRsβ47Updated 3 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding predictionβ33Updated 3 years ago
- Knowledge-primed neural networksβ38Updated 2 years ago
- Connectivity Map analysis in MATLABβ46Updated 3 years ago
- What you need to process the Quarterly DepMap-Omics releases from Terraβ120Updated last week
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopesβ16Updated 2 years ago
- A VGAE-based model to infer transcription factor regulatory networkβ28Updated 3 years ago
- β36Updated 2 years ago
- A deep generative neural network based approach to impute drug responseβ21Updated 4 years ago
- β17Updated 4 years ago
- repository containing analysis scripts and auxiliary filesβ36Updated 5 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunityβ72Updated 2 years ago
- β28Updated 4 years ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"β15Updated 4 years ago
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236β45Updated 3 years ago
- β10Updated last year
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequencβ¦β30Updated 2 years ago
- flexible CDR based distance metricsβ66Updated last year