kekegg / DLEPSLinks
A Deep Learning based Efficacy Prediction System for drug discovery
β71Updated 2 years ago
Alternatives and similar repositories for DLEPS
Users that are interested in DLEPS are comparing it to the libraries listed below
Sorting:
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding predictionβ34Updated 3 years ago
- π [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potentialβ21Updated this week
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigenβ84Updated 3 years ago
- A visible neural network model for drug response predictionβ148Updated 2 years ago
- Functional Embedding of Gene Signaturesβ46Updated last year
- NetTCR-2.0. Sequence-based prediction of peptide-TCR bindingβ35Updated 3 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbationβ48Updated 2 months ago
- CMap Notebooks for LINCS 2020 Workshopβ46Updated 4 years ago
- A VGAE-based model to infer transcription factor regulatory networkβ28Updated 3 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.β56Updated 3 years ago
- β17Updated 4 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbβ¦β62Updated 9 months ago
- Deep Learning Method to Identify Cancer Associated TCRsβ47Updated 3 years ago
- HLA-II ligand predictor.β44Updated 2 years ago
- β28Updated 5 years ago
- Knowledge-primed neural networksβ38Updated 2 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq dataβ56Updated last year
- repository containing analysis scripts and auxiliary filesβ36Updated 5 years ago
- flexible CDR based distance metricsβ67Updated last year
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Dataβ120Updated 2 weeks ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.β124Updated 8 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graphβ74Updated 7 months ago
- What you need to process the Quarterly DepMap-Omics releases from Terraβ123Updated 2 weeks ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/toolsβ134Updated 3 years ago
- Connectivity Map analysis in MATLABβ46Updated 3 years ago
- L1000 peak deconvolution based on Bayesian analysisβ26Updated 3 years ago
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopesβ17Updated 2 years ago
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structureβ65Updated last year
- β11Updated 4 months ago
- Python package to load and query ARCHS4 dataβ23Updated 2 months ago