Code and Data for Generative modeling for AAV design
☆10Nov 13, 2023Updated 2 years ago
Alternatives and similar repositories for Generative_AAV_design
Users that are interested in Generative_AAV_design are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data Files for "Deep diversification of an AAV capsid protein by machine learning"☆18Mar 9, 2021Updated 5 years ago
- Analysis for "Comprehensive fitness landscape of AAV capsid reveals a viral gene and enables machine-guided design"☆26Dec 15, 2019Updated 6 years ago
- Bioinformatics code for paper associated with deep diversification of AAV☆42Nov 27, 2024Updated last year
- 🧛 Deep generative models for TCR sequences 🧛☆17Apr 4, 2022Updated 3 years ago
- Automated and variant-aware CRISPR/Cas9 editing outcome predictor☆10Sep 10, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Python package to manage protein structures and their annotations☆45Mar 18, 2026Updated last week
- Jupyter notebooks from our weekly (or so) hackathons☆11Dec 3, 2024Updated last year
- ☆17Dec 8, 2022Updated 3 years ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 7 months ago
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Oct 16, 2022Updated 3 years ago
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆18Jun 9, 2022Updated 3 years ago
- 🛜 An interactive browser for the VDJdb database☆15Updated this week
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Independent evaluation set construction for trustworthy ML models in biochemistry☆16Mar 20, 2026Updated last week
- We introduce a differentiable approach to phylogenetic tree construction, optimizing tree and ancestral sequences in its original represe…☆20Mar 4, 2026Updated 3 weeks ago
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 7 years ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆74Oct 14, 2023Updated 2 years ago
- pygor3 repository☆10Nov 20, 2025Updated 4 months ago
- ☆17Mar 26, 2024Updated 2 years ago
- Clone from http://people.sc.fsu.edu/~jburkardt/cpp_src/cpp_src.html☆28Feb 3, 2018Updated 8 years ago
- 📝 [Paper/Tutorial] T-cell repertoire annotation and motif discovery☆14Sep 15, 2025Updated 6 months ago
- ☆21Dec 21, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Course: Databases☆12May 5, 2020Updated 5 years ago
- 从底层机理了解Transformer☆27Mar 4, 2022Updated 4 years ago
- This repo focuses on supervised and self-supervised bio-sequence representation learning☆22Oct 11, 2023Updated 2 years ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 4 years ago
- Protein function prediction using a variational autoencoder☆93Mar 7, 2018Updated 8 years ago
- Visualises an ellipsoid in 3d given a mean and covariance matrix from a dataset.☆13Oct 28, 2018Updated 7 years ago
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆37Aug 7, 2023Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54May 2, 2022Updated 3 years ago
- ☆17Jun 24, 2021Updated 4 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Feb 6, 2025Updated last year
- Fitness landscape exploration sandbox for biological sequence design.☆170Feb 16, 2023Updated 3 years ago
- ☆15Jun 11, 2021Updated 4 years ago
- MongoDB 3.6 Developer Workshop☆10Apr 27, 2018Updated 7 years ago
- ☆30Dec 11, 2025Updated 3 months ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆11Mar 2, 2023Updated 3 years ago
- Scripts for making Hadoop deployments in AWS easy☆10Feb 26, 2014Updated 12 years ago