cellcollective / ccapiLinks
A Python Library to interact with the Cell Collective API v2
☆12Updated 2 years ago
Alternatives and similar repositories for ccapi
Users that are interested in ccapi are comparing it to the libraries listed below
Sorting:
- toolkit for the manipulation and analysis of Logical Qualitative Models of biological regulatory networks☆19Updated last month
- Synthesis and Reprogramming of Most Permissive Boolean Networks☆13Updated last month
- Static analyzer for dynamics of Automata Networks☆12Updated 4 years ago
- A collection of 230+ Boolean networks from various sources useful for benchmarking or testing.☆13Updated 3 months ago
- Python Environment for Modeling and Simulating Biological Systems☆123Updated 3 months ago
- PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.☆50Updated 11 months ago
- Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++☆16Updated last year
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆23Updated 8 months ago
- Constraint-based modeling framework for the enumeration of pathway analysis concepts☆14Updated 2 years ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated 2 weeks ago
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆13Updated 2 months ago
- COBRApy is a package for constraint-based modeling of metabolic networks.☆520Updated last week
- Dynamic FBA for use with COBRApy metabolic models☆10Updated 2 years ago
- libRoadRunner: A high-performance SBML simulator☆52Updated this week
- Brief Python implementation of Most Permissive Boolean Networks☆19Updated 2 weeks ago
- A simplified python interface to COPASI.☆24Updated last week
- The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:☆268Updated last week
- memote – the genome-scale metabolic model test suite☆142Updated 2 months ago
- Python utilities for SBML☆41Updated last week
- Access to Biological Web Services from Python.☆315Updated last week
- The BiGG Models website server☆84Updated 5 years ago
- Build, share, and embed visualizations of metabolic pathways.☆226Updated last year
- The generic genome-scale metabolic model of Homo sapiens☆122Updated last month
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆62Updated last month
- Metabolic Engineering Workbench☆40Updated last year
- An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…☆58Updated this week
- 2 ~ 6 sets venn diagram for python☆348Updated last year
- The Synthetic Biology Open Language (SBOL)☆22Updated 2 years ago
- cameo - computer aided metabolic engineering & optimization☆120Updated 2 years ago
- Mackinac: A bridge between ModelSEED and COBRApy☆19Updated 7 years ago