Sage-Bionetworks / synapsePythonClientLinks
Programmatic interface to Synapse services for Python
☆78Updated last week
Alternatives and similar repositories for synapsePythonClient
Users that are interested in synapsePythonClient are comparing it to the libraries listed below
Sorting:
- python / numpy / pandas / patsy version of ComBat for removing batch effects.☆105Updated 7 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Updated 2 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆44Updated 5 months ago
- A catalog of appyter notebooks☆41Updated last month
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 5 years ago
- MyGene.info: A BioThings API for gene annotations☆130Updated 4 months ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Python API for Xena Hub☆55Updated 2 years ago
- GDC Data Transfer Tool☆154Updated 7 months ago
- VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:☆34Updated 2 years ago
- Predicting Cell Health with Morphological Profiles☆39Updated 3 years ago
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆119Updated 7 months ago
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆96Updated last year
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆45Updated 3 months ago
- A data-centric flow/mass cytometry automated analysis framework☆42Updated 11 months ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- Code and documentation for the curation of cellxgene datasets☆50Updated this week
- Official repository for GDC User Guides in Markdown format☆61Updated this week
- Python biomart API☆69Updated 2 years ago
- ☆26Updated 5 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Representation Learning for detection of phenotype-associated cell subsets☆66Updated 5 years ago
- A Python library for reading and writing Flow Cytometry Standard (FCS) files☆55Updated 2 months ago
- GWAS data analysis experiments☆24Updated 5 years ago
- Tutorials for the InterMine Python web client☆14Updated 3 years ago
- Subpopulation detection in high-dimensional single-cell data☆73Updated 5 years ago
- A collection of scripts and tools for loading, processing, and handling single cell data.☆76Updated 3 months ago
- Spatial Transcriptomics Dashboard☆27Updated 2 years ago
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆47Updated 7 years ago
- Automated Modelling for Biological Evidence-based Research☆47Updated 2 years ago