A scalable cloning system
☆26Jun 15, 2023Updated 3 years ago
Alternatives and similar repositories for octopus
Users that are interested in octopus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PlasmidMaker is a versatile, automated, and high throughput end-to-end platform for plasmid construction☆10May 26, 2022Updated 4 years ago
- ☆23Jul 1, 2020Updated 6 years ago
- a DNA assembly library☆23Aug 13, 2025Updated last year
- A variation on Melinda Green's buddhabrot visualization technique.☆10Jan 16, 2019Updated 7 years ago
- DNA overhang misannealing data for Python☆14May 15, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- ☆11Feb 11, 2021Updated 5 years ago
- Identify gender of personal names based on when a person may have been born☆10Feb 18, 2014Updated 12 years ago
- Universal API for Synthetic Biology parts, allowing for automation. Aggregates data from all major providers into a new Biobrick format, …☆13Apr 29, 2026Updated 6 months ago
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆13May 10, 2026Updated 5 months ago
- ☆13Aug 18, 2026Updated 2 months ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆233Oct 19, 2026Updated last week
- Open-source chemical drawing app for macOS and Windows, with plugins and AI-agent tools (MCP server, CLI, agent skill)☆33Updated this week
- An unofficial R package for working with Benchling.☆13Jun 16, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python Implementation of Codon Adaption Index☆38Feb 1, 2023Updated 3 years ago
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆25Feb 16, 2021Updated 5 years ago
- 🎨 Python library to plot multi-part genetic constructs☆27Apr 9, 2025Updated last year
- Easily download genomes and build BLAST/Bowtie indexes in Python☆24Sep 30, 2022Updated 4 years ago
- ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data☆11Sep 6, 2022Updated 4 years ago
- new repo☆28May 18, 2021Updated 5 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆23Oct 27, 2020Updated 6 years ago
- Deep networks for protein functional inference☆196Mar 11, 2026Updated 7 months ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆48Sep 20, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- LLMs for microplate data☆43Oct 11, 2024Updated 2 years ago
- Code for running Illumina Library Prep on Hamilton STARlet with PyLabRobot, originally built for in-house use at Pioneer Labs (Emeryville…☆12Apr 2, 2026Updated 6 months ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- Mol* as anywidget☆55Oct 13, 2025Updated last year
- Data Hub makes lab instrument data instantly accessible to people, pipelines, and agents☆16Updated this week
- A versatile DNA sequence optimizer☆283Nov 5, 2025Updated 11 months ago
- ☆20Jun 17, 2013Updated 13 years ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆38Nov 7, 2022Updated 3 years ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆55Nov 21, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- DeepRegFinder is a deep learning based program used to identify DNA regulatory elements using ChIP-seq☆12Mar 28, 2024Updated 2 years ago
- This repository contains the custom scripts used in the automated workflows hosted on the NIH 3D Print Exchange (3dprint.nih.gov).☆11Aug 7, 2017Updated 9 years ago
- Python package simulating artificial selection on microbial communities☆15Aug 15, 2023Updated 3 years ago
- Study management software for research organizations.☆31Oct 7, 2026Updated 3 weeks ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆67Sep 30, 2020Updated 6 years ago
- A datastructure for EHR data☆15Updated this week
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated last year