toolkit for the manipulation and analysis of Logical Qualitative Models of biological regulatory networks
☆20Nov 13, 2025Updated 4 months ago
Alternatives and similar repositories for bioLQM
Users that are interested in bioLQM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Static analyzer for dynamics of Automata Networks☆12Feb 3, 2021Updated 5 years ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated this week
- Synthesis and Reprogramming of Most Permissive Boolean Networks☆16Feb 23, 2026Updated last month
- Brief Python implementation of Most Permissive Boolean Networks☆21Mar 9, 2026Updated 2 weeks ago
- Constraint-based modeling framework for the enumeration of pathway analysis concepts☆14Jul 6, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Python library for attractor identification and control in Boolean networks☆31Sep 23, 2025Updated 6 months ago
- Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data.☆13Nov 24, 2025Updated 4 months ago
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Mar 14, 2026Updated last week
- A simulation framework to analyze signal flows in complex networks☆15Mar 7, 2023Updated 3 years ago
- Shiny App for Load Balancing☆13Aug 4, 2014Updated 11 years ago
- A collection of 280+ Boolean networks from various sources useful for benchmarking or testing.☆20Updated this week
- Simulation and inference of gene regulatory networks based on transcriptional bursting☆13Oct 26, 2025Updated 5 months ago
- SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.☆15Oct 17, 2025Updated 5 months ago
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆159Mar 20, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆14Jul 18, 2021Updated 4 years ago
- SON-EM - Algorithm for parameter estimation of hybrid time-varying parameter systems using Sum of Norms regularization and Expectation Ma…☆10Mar 8, 2018Updated 8 years ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆11Mar 2, 2023Updated 3 years ago
- CANAlization: Control & Redundancy in Boolean Networks☆27Mar 12, 2026Updated 2 weeks ago
- 🫓 A parser for the FlatZinc modelling language☆14Feb 27, 2025Updated last year
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- The PomBase community curation tool☆19Mar 19, 2026Updated last week
- R implementation of Robust Rank Aggregation algortihm☆11Jun 8, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Boolean Network Modeling☆40Jan 31, 2020Updated 6 years ago
- ☆10Dec 3, 2019Updated 6 years ago
- Implements boolean algebra in one module.☆86Apr 3, 2025Updated 11 months ago
- FromTo is a helper library that makes it simple to handle asynchronous actions with views for Android and Java/Kotlin.☆14Feb 25, 2016Updated 10 years ago
- Repository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper☆11Dec 2, 2025Updated 3 months ago
- ☆22Nov 11, 2019Updated 6 years ago
- Theses-Checker is a tool for students and teachers alike to check theses for frequent typographical errors and see content analysis for q…☆16Jan 5, 2026Updated 2 months ago
- pytest-plus adds new features to pytest☆12Oct 27, 2025Updated 5 months ago
- Implementation of the cellular Potts model in pure javascript for fun an easy visualisation.☆11Mar 7, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Compress graphs☆12Jan 6, 2020Updated 6 years ago
- Official implementation of the paper "HermesBDD: A Multi-Core and Multi-Platform Binary Decision Diagram Package" accepted @ DDECS 2023.☆13Jul 11, 2025Updated 8 months ago
- MiniSat reimplemented in Rust☆20Apr 18, 2018Updated 7 years ago
- Rust xml tree parser to read, modify, and write xml☆10Nov 5, 2021Updated 4 years ago
- an R wrapper for the Gnu Scientific Library☆18Updated this week
- Alternative, underscore syntax for anonymous functions in Julia☆16Apr 9, 2021Updated 4 years ago
- A domain-specific language that allows the expression or protein interactions that can be used to build executable models.☆23Dec 13, 2022Updated 3 years ago