Alternatives and similar repositories for mzR

Users that are interested in mzR are comparing it to the libraries listed below

• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆34Updated 4 years ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 8 years ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 7 months ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆64Updated 8 months ago
• fgcz / rawDiag
  Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
  ☆37Updated last year
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆58Updated 3 months ago
• lgatto / MSnbase
  Base Classes and Functions for Mass Spectrometry and Proteomics
  ☆136Updated 4 months ago
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆28Updated 2 months ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆48Updated 2 months ago
• lgatto / RforProteomics
  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
  ☆99Updated 4 months ago
• rformassspectrometry / Spectra
  Low level infrastructure to handle MS spectra
  ☆43Updated 2 weeks ago
• cbielow / PTXQC
  A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
  ☆47Updated 5 months ago
• Vitek-Lab / MSstats
  R package - MSstats
  ☆88Updated 2 months ago
• SlavovLab / DO-MS
  An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.
  ☆27Updated 9 months ago
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆33Updated 3 years ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated last year
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated last month
• YanglabWCH / StatsPro
  StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…
  ☆13Updated 3 years ago
• DorresteinLaboratory / XCMS3_FeatureBasedMN
  ☆14Updated 3 years ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆31Updated 2 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆47Updated 3 weeks ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆13Updated 2 months ago
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆29Updated 5 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• ncats / RaMP-DB
  ☆37Updated last month
• Swarchal / platetools
  An R package for plotting microtitre plates
  ☆55Updated last year
• WMBEdmands / MetMSLine
  R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software
  ☆10Updated 8 years ago