catmaid / CATMAIDLinks
Collaborative Annotation Toolkit for Massive Amounts of Image Data
☆198Updated 3 weeks ago
Alternatives and similar repositories for CATMAID
Users that are interested in CATMAID are comparing it to the libraries listed below
Sorting:
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Updated last week
- Visualize, share and annotate your large 3D images online☆160Updated this week
- Read and write Neuroglancer datasets programmatically.☆167Updated 2 weeks ago
- ilastik-shell, applets, and workflows to string them together.☆385Updated last week
- ImJoy: Deep Learning Made Easy!☆191Updated 2 years ago
- www.vaa3d.org☆80Updated 7 years ago
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …☆214Updated last week
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Updated 9 months ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Updated 7 years ago
- website for the napari image viewer☆47Updated this week
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 4 months ago
- GPU accelerated image/volume processing in Python☆112Updated 7 months ago
- Software package for neuron reconstruction and visualization☆40Updated 6 months ago
- Collaborative vectorial annotation tool for ultra high resolution data.☆46Updated 2 years ago
- Python module to analyse skeleton (thin object) images☆138Updated 2 months ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated last week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆62Updated last week
- Scalable Optical Flow-based Image Montaging and Alignment☆83Updated last week
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆12Updated 4 years ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆26Updated 3 weeks ago
- A Python tiff library☆138Updated last week
- Fiji website☆37Updated last month
- Render transformed image tiles☆34Updated last week