adwanner / PyKNOSSOSLinks
PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation of 3D electron microscopy stacks of brain tissue. https://www.ariadne.ai
☆18Updated 5 years ago
Alternatives and similar repositories for PyKNOSSOS
Users that are interested in PyKNOSSOS are comparing it to the libraries listed below
Sorting:
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆27Updated 6 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 9 months ago
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Aligner for large scale serial section image data☆16Updated last year
- Software package for neuron reconstruction and visualization☆38Updated last week
- website for the napari image viewer☆44Updated last week
- ☆40Updated 5 years ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated last year
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆64Updated this week
- python tools for BigDataViewer☆22Updated 5 months ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆26Updated last week
- Process images using SimpleITK in napari☆21Updated last month
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated last month
- Block-wise task scheduling for large nD volumes.☆30Updated 2 months ago
- Render transformed image tiles☆34Updated 2 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆82Updated this week
- 3-D imaging visualisation through slicing☆29Updated 4 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last month
- Python module for registering and fusing multi-view microscopy data☆23Updated 2 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- Easily read and write ome-tiff images in python☆27Updated last year
- ImageJ convenience layer for N5☆17Updated 3 weeks ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated last month
- WebGL-based viewer for volumetric data☆23Updated last week
- ☆12Updated 4 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆84Updated last year
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago