PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation of 3D electron microscopy stacks of brain tissue. https://www.ariadne.ai
☆18May 18, 2020Updated 6 years ago
Alternatives and similar repositories for PyKNOSSOS
Users that are interested in PyKNOSSOS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- InVivoTools a set of neurophysiology tools, forked from VanHooserTools, containing tools for visual stimulation and analysis of calcium i…☆14Jun 2, 2026Updated 2 months ago
- Instrument Control for Microscopes and Accessories☆12Jan 31, 2019Updated 7 years ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- Conversion of neuroimaging data for display in Neuroglancer☆31Aug 19, 2026Updated last week
- Motion Tracking☆13Jan 12, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆14Sep 7, 2021Updated 4 years ago
- Deep neural network for low-dose electron micrograph denoising☆15Oct 20, 2020Updated 5 years ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆13Jul 15, 2020Updated 6 years ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- iOS example of convolutional neural network image recognition leveraging tensor flow☆19Jun 21, 2017Updated 9 years ago
- A general purpose citizen science game template for scientific research☆26Mar 3, 2023Updated 3 years ago
- PIPython is a collection of Python modules to access a PI device and process GCS data.☆15Oct 14, 2019Updated 6 years ago
- ☆10Feb 8, 2023Updated 3 years ago
- Versatile acquisition software for serial block-face electron microscopy☆26Aug 3, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Image processing and tools for widefield imaging☆20Dec 7, 2019Updated 6 years ago
- Basic integration for Slack notifications for Matlab.☆21Nov 20, 2014Updated 11 years ago
- Plugins collated for the Fiji Cookbook☆27Jun 14, 2022Updated 4 years ago
- Python samples for Micro-Manager: image acquisition and microscope control system☆24Sep 26, 2019Updated 6 years ago
- Distributed Gradient-Domain Processing of Planar and Spherical Images☆26Dec 30, 2020Updated 5 years ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 7 months ago
- AXI MIPI CSI2 RX FPGA core and kernel driver☆19Jul 4, 2015Updated 11 years ago
- 🔍 Track user interactions with Mixpanel in Shiny apps or R scripts☆13Aug 19, 2025Updated last year
- Automated quantification of fibrous networks☆13Mar 10, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Read and write Neuroglancer datasets programmatically.☆175Aug 13, 2026Updated 2 weeks ago
- lodepng-turbo is a fast PNG image codec that uses SIMD instructions (MMX, SSE2, AVX2, NEON) to accelerate baseline PNG decompression on x…☆20Jan 22, 2019Updated 7 years ago
- SIMD sorting network generator and very basic tester☆16Apr 2, 2022Updated 4 years ago
- Open-source laser beam profiling software designed for cheap webcams☆26Jul 18, 2016Updated 10 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Updated this week
- Collaborative Approach for eNhanced Denoising under Low-light Excitation☆20Jun 5, 2025Updated last year
- The presentation at Spark Summit 2014 showing how 4Quant does production scale image processing and analysis using Spark☆16Jul 29, 2014Updated 12 years ago
- Arduino-based micro-controller firmware for LED array microscope illuminators☆26Aug 5, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Runway Port of BigBiGAN from the paper "Large Scale Adversarial Representation Learning"☆10Dec 10, 2024Updated last year
- Prostate gland segmentation with deep Convolutional Neural Networks☆10May 29, 2017Updated 9 years ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆40Jul 2, 2026Updated last month
- T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It w…☆10Sep 3, 2019Updated 6 years ago
- 3-D imaging visualisation through slicing☆31Jan 14, 2025Updated last year
- A fast, small, efficient pthreads based threadpool in c☆16Mar 2, 2021Updated 5 years ago
- 3D dense segmentation compression codec based on crack codes.☆18Updated this week