Aligner for large scale serial section image data
☆19Jul 7, 2023Updated 3 years ago
Alternatives and similar repositories for Alignment_Projects
Users that are interested in Alignment_Projects are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆16Apr 13, 2019Updated 7 years ago
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It w…☆10Sep 3, 2019Updated 6 years ago
- ☆10Feb 8, 2023Updated 3 years ago
- Open source volume electron microscopy (vEM) datasets for connectomics.☆18Aug 17, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Distributed Proofreading of Automatic Segmentations☆15Sep 30, 2022Updated 3 years ago
- ☆17Feb 3, 2018Updated 8 years ago
- A unified environment for DNN-based automated segmentation of neuronal EM images☆38Aug 28, 2024Updated 2 years ago
- 🌈☆70Oct 10, 2025Updated 10 months ago
- ☆19May 12, 2023Updated 3 years ago
- Resources for Heinrich et al., 2021☆20May 28, 2021Updated 5 years ago
- How to install LPSOLVE and use it with Python☆15Apr 11, 2017Updated 9 years ago
- patches for Dirk-Jan Kroon's Fast Marching Matlab Toolbox☆11Nov 12, 2014Updated 11 years ago
- Affinity based segmentation algorithms and tools☆12May 12, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- AAN: Appearance Adjustment Networks to enhance deep learning-based image registration☆12Jan 1, 2025Updated last year
- Sample code for a Zapier engineering blog post☆14Nov 23, 2013Updated 12 years ago
- Smart Parallel Automated Cryo Electron tomography☆24Jun 28, 2026Updated 2 months ago
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆15Apr 16, 2026Updated 4 months ago
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆26Mar 5, 2025Updated last year
- Some people are prohibited to use their favorite web browsers. The faster we browse web pages, the more efficient we collect the informat…☆13Feb 8, 2022Updated 4 years ago
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- napari plugin for annotation using Segment Anything (SAM) for instance segmentation and dataset creation☆32Aug 20, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- TREES toolbox☆29Updated this week
- This repository is for the openFrame microscope and supporting projects☆17Aug 5, 2026Updated 3 weeks ago
- This repository contains the entire pipline (including data preprocessing, training, testing, evaluation and visualization) for the Shear…☆11Dec 3, 2019Updated 6 years ago
- Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).☆13May 2, 2022Updated 4 years ago
- ☆19Apr 14, 2023Updated 3 years ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated last year
- dataset info for the neurofinder challenge☆13Aug 3, 2016Updated 10 years ago
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 4 years ago
- SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI☆47May 11, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 4 months ago
- From our paper "OSMO: Online Specific Models for Occlusion in Multiple Object Tracking under Surveillance Scene" in ACM Multimedia 2018.☆11Apr 9, 2019Updated 7 years ago
- Rhoana - Dense Automated Neuron Annotation pipeline☆29May 4, 2017Updated 9 years ago
- Generator of binary installers for libraries built by vcpkg, alpha version.☆11Aug 5, 2021Updated 5 years ago
- A 3D printed modification to the DLP4710EVM DMD to turn it into a lab-usable spatial light modulator.☆16Apr 5, 2021Updated 5 years ago
- 《统计学习方法_李航》每章算法的具体实现(不依赖与其他库)☆11Feb 20, 2017Updated 9 years ago
- ☆12Mar 25, 2022Updated 4 years ago