Helpers to use BigDataViewer as a quick visualization tool in other projects.
☆26Jun 13, 2024Updated 2 years ago
Alternatives and similar repositories for bigdataviewer-vistools
Users that are interested in bigdataviewer-vistools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ImgLib2-based viewer for registered SPIM stacks and more☆43Jun 15, 2026Updated 2 weeks ago
- ☆21Updated this week
- CLIJ is deprecated. Visit CLIJ2☆57Jun 12, 2021Updated 5 years ago
- Fiji plugins for starting BigDataViewer and exporting data.☆22Sep 19, 2025Updated 9 months ago
- Simple Maven project for an ImageJ2 command☆34Apr 11, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Friendly base POM for all SciJava-based software☆28Updated this week
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 3 months ago
- Create 3D/4D animations using a natural language-based syntax☆61Jun 6, 2025Updated last year
- Deep Zoom Plate Viewer for microscopy images☆18May 7, 2026Updated last month
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Jun 3, 2022Updated 4 years ago
- ImageJ+ImageJ2 compatibility layer☆17May 7, 2026Updated last month
- StarDist plugin for ImageJ☆32May 9, 2022Updated 4 years ago
- ImageJ convenience layer for N5☆21Updated this week
- Browse your OMERO database from within napari.☆40Jun 26, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A minimal dependency napari plugin giving access to scikit-image functions☆23Mar 26, 2026Updated 3 months ago
- Various parts made for fluorescence microscopy + optics work☆17Jul 22, 2019Updated 6 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jun 26, 2026Updated last week
- ☆22Mar 13, 2024Updated 2 years ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆75Jun 22, 2026Updated 2 weeks ago
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆81Jun 24, 2026Updated last week
- The ImageJ wiki☆30Updated this week
- Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"☆11Oct 27, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Jun 3, 2026Updated last month
- python tools for BigDataViewer☆23Updated this week
- Shell scripts for scientific projects written in Java☆17May 4, 2026Updated 2 months ago
- Mistral-java-client is a client for the Mistral.ai API. It allows you to easily interact with the Mistral AI models. Currently supports a…☆14Jul 28, 2025Updated 11 months ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆21May 25, 2026Updated last month
- 🚚 AutoTx 🪄 - a smart background file transfer service for Windows.☆28Jun 24, 2026Updated last week
- Not HDF5☆201Jun 18, 2026Updated 2 weeks ago
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆59Jun 30, 2025Updated last year
- ImageJ Ops: "Write once, run anywhere" image processing☆93Aug 29, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji☆12May 6, 2025Updated last year
- ☆115Updated this week
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Jul 15, 2015Updated 10 years ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆47Jun 11, 2026Updated 3 weeks ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆36Jun 4, 2026Updated last month
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated last month
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago