Alternatives and similar repositories for bigdataviewer-vistools:

Users that are interested in bigdataviewer-vistools are comparing it to the libraries listed below

• bigdataviewer / bigdataviewer-core
  ImgLib2-based viewer for registered SPIM stacks and more
  ☆38Updated last month
• bigdataviewer / bigdataviewer_fiji
  Fiji plugins for starting BigDataViewer and exporting data.
  ☆21Updated 3 months ago
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆35Updated last year
• bigdataviewer / bigdataviewer-playground
  ☆19Updated last month
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆69Updated 2 months ago
• BIOP / ijl-utilities-wrappers
  Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
  ☆33Updated 3 weeks ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆16Updated last month
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆27Updated last week
• imagej / example-imagej2-command
  Simple Maven project for an ImageJ2 command
  ☆30Updated 2 years ago
• mobie / mobie-viewer-fiji
  ☆34Updated this week
• dwaithe / ONBI_image_analysis
  This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course
  ☆18Updated 7 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆21Updated 2 weeks ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆28Updated last week
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆21Updated last month
• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆58Updated last year
• ved-sharma / HyperStackReg
  An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
  ☆11Updated 2 years ago
• clEsperanto / i2k2020_tutorial_clij_clesperanto
  ☆12Updated 4 years ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆39Updated last month
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆23Updated 3 years ago
• clij / clij2
  GPU-accelerated image processing for everyone
  ☆50Updated 6 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆61Updated last month
• saalfeldlab / n5-viewer
  BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
  ☆19Updated last month
• tferr / Scripts
  Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
  ☆24Updated 2 years ago
• scijava / pom-scijava
  Friendly base POM for all SciJava-based software
  ☆26Updated this week
• abcucberkeley / PetaKit5D
  ☆36Updated 3 weeks ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated last year
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated last year
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆35Updated this week
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago