Alternatives and similar repositories for bigdataviewer-vistools

Users that are interested in bigdataviewer-vistools are comparing it to the libraries listed below

• bigdataviewer / bigdataviewer-core
  ImgLib2-based viewer for registered SPIM stacks and more
  ☆41Updated last week
• bigdataviewer / bigdataviewer-playground
  ☆20Updated last month
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 11 months ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆39Updated last week
• bigdataviewer / bigdataviewer_fiji
  Fiji plugins for starting BigDataViewer and exporting data.
  ☆22Updated 2 months ago
• tferr / Scripts
  Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
  ☆26Updated 3 years ago
• miura / NEUBIAS_AnalystSchool2020
  ☆13Updated 5 years ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated 3 weeks ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• saalfeldlab / paintera
  ☆110Updated 2 months ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆18Updated 2 years ago
• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last week
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆19Updated last month
• JaneliaSciComp / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆78Updated last month
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆11Updated 2 years ago
• guiwitz / napari_demo
  ☆23Updated 4 years ago
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆28Updated 2 weeks ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆26Updated 4 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆95Updated this week
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 8 months ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆24Updated 8 months ago
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆23Updated 3 months ago
• mobie / mobie-viewer-fiji
  ☆41Updated this week
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• AstraZeneca / napari-wsi
  A plugin to read whole slide images within napari.
  ☆21Updated 2 weeks ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆16Updated 5 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆58Updated 4 months ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆60Updated last week
• PolusAI / nyxus
  A fully scalable robust image feature extraction library.
  ☆27Updated this week
• NEUBIAS / Defragmentation_TS2_EOSC-Life_2023
  "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…
  ☆10Updated 2 years ago