Python library to interface with CATMAID servers. Fully interoperable with navis.
☆24Mar 19, 2025Updated 11 months ago
Alternatives and similar repositories for pymaid
Users that are interested in pymaid are comparing it to the libraries listed below
Sorting:
- Python library for analysis of neuroanatomical data.☆110Updated this week
- Tools for working with single-neuron morphological reconstructions☆22Feb 14, 2026Updated 2 weeks ago
- ☆40Sep 1, 2025Updated 6 months ago
- ☆13Feb 11, 2026Updated 3 weeks ago
- 2D image registration in python, using napari.☆16Dec 7, 2021Updated 4 years ago
- B-LRP is the repository for the paper How Much Can I Trust You? — Quantifying Uncertainties in Explaining Neural Networks☆18Jun 22, 2022Updated 3 years ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Datasets☆26Apr 30, 2015Updated 10 years ago
- Building blocks for uncertainty-aware cycle consistency presented at NeurIPS'21.☆26Oct 28, 2021Updated 4 years ago
- TREES toolbox☆29Apr 23, 2025Updated 10 months ago
- Shared Latent Space VAE's☆28Apr 20, 2020Updated 5 years ago
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 5 months ago
- Spatial Transcriptomics Dashboard☆27Jul 6, 2023Updated 2 years ago
- NeurIPS 2022: Tree Mover’s Distance: Bridging Graph Metrics and Stability of Graph Neural Networks☆37Aug 4, 2023Updated 2 years ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Updated this week
- R scripts and data sets that can be used to reproduce the results presented in the paper "Bayesian additive regression trees with model t…☆10Dec 13, 2022Updated 3 years ago
- Pytorch Implementation of Lightweight and robust representation of economic scales from satellite imagery.☆13Nov 21, 2019Updated 6 years ago
- The Zhang's lab aims to provide a model or GUI of algorithm for example and further studies. ALL of them are used just for research, but…☆10Apr 13, 2020Updated 5 years ago
- The code of APP, Scalable Graph Embedding for Asymmetric Proximity. Zhou, Chang and Liu, Yuqiong and Liu, Xiaofei and Liu, Zhongyi and Ga…☆10Nov 11, 2018Updated 7 years ago
- A system used to request absentee ballots in the state of Virginia. 📬☆10Sep 14, 2023Updated 2 years ago
- ☆11Feb 18, 2022Updated 4 years ago
- A data analysis package for high-dimensional, multi-block data.☆12Jan 13, 2022Updated 4 years ago
- Image Annotator Web-app using Plotly-Dash, MongoDB, and MLflow☆14Nov 22, 2022Updated 3 years ago
- SODEN: A Scalable Continuous-Time Survival Model through Ordinary Differential Equation Networks☆14Mar 2, 2023Updated 3 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- Read and write Neuroglancer datasets programmatically.☆170Updated this week
- ☆13Apr 27, 2020Updated 5 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- ☆11Dec 23, 2022Updated 3 years ago
- Interactive visualization tool for multiple volumes, meshes and points based on VTK. The app can be controlled with Python scripts (optio…☆11Mar 13, 2022Updated 3 years ago
- Biologically-Constrained Graphs for Global Connectomics Reconstruction☆11Feb 9, 2021Updated 5 years ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆13Dec 5, 2025Updated 3 months ago
- Minimal VIPS Docker image based on Alpine Linux☆11Sep 9, 2024Updated last year
- Pushing the limits of capsule networks.☆12Dec 7, 2022Updated 3 years ago
- Turing Complete circuit to verilog☆14May 17, 2022Updated 3 years ago
- This is a read-only mirror of the CRAN R package repository. epiR — Tools for the Analysis of Epidemiological Data☆10Feb 23, 2026Updated last week
- A Python library that hits the KEXP Legacy API to create a Spotify playlist for a given period in time.☆11Apr 29, 2021Updated 4 years ago
- Labelmaker using SVG templates and CSV data☆10Aug 13, 2023Updated 2 years ago