Alternatives and similar repositories for n5

Users that are interested in n5 are comparing it to the libraries listed below

• constantinpape / z5
  Lightweight C++ and Python interface for datasets in zarr and N5 format
  ☆127Updated 6 months ago
• hms-dbmi / vizarr
  A minimal Zarr image viewer based on Viv.
  ☆170Updated last month
• dask / dask-image
  Distributed image processing
  ☆223Updated last week
• zarr-developers / zarr-specs
  Zarr core protocol for storage and retrieval of N-dimensional typed arrays
  ☆104Updated last month
• JaneliaSciComp / xarray-multiscale
  scalable multiscale image pyramids in python
  ☆29Updated last year
• imjoy-team / imjoy-rpc
  The RPC library used in ImJoy.
  ☆25Updated last year
• zarr-developers / zarr_implementations
  ☆41Updated last year
• ome / ngff
  Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
  ☆142Updated this week
• TheJacksonLaboratory / zarrdataset
  A dataset for loading zarr files to be used in machine learning training pipelines
  ☆34Updated 5 months ago
• pyapp-kit / ndv
  Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
  ☆86Updated 2 weeks ago
• manzt / simple-zarr-server
  serve Zarr datasets via HTTP
  ☆31Updated 2 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated this week
• JaneliaSciComp / pydantic-ome-ngff
  Pydantic models for OME-NGFF
  ☆24Updated 2 months ago
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated last month
• ome / ome-zarr-py
  Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
  ☆217Updated this week
• bcdev / jzarr
  A Java implementation of the API offered by the Python zarr package
  ☆34Updated 6 months ago
• zarrs / zarrs-python
  A CodecPipeline for zarr-python backed by the zarrs Rust crate
  ☆57Updated this week
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆54Updated last week
• VolkerH / DaskFusion
  Fusing image tiles with dask array's map_blocks
  ☆30Updated last year
• xtensor-stack / xtensor-zarr
  Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.
  ☆46Updated 3 years ago
• saalfeldlab / n5-zarr
  Zarr filesystem backend for N5
  ☆17Updated 2 weeks ago
• constantinpape / heimdall
  Python based viewer for large mulit-dimensional datasets.
  ☆20Updated 5 years ago
• chanzuckerberg / napari-hub
  Discover, install, and share napari plugins
  ☆54Updated 3 weeks ago
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆40Updated this week
• vispy / jupyter_rfb
  Remote Frame Buffer for Jupyter
  ☆80Updated 2 weeks ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 4 months ago
• scalableminds / zarrita
  ☆20Updated last week
• imglib / imglyb
  Connecting Java/ImgLib2 + Python/NumPy
  ☆30Updated 4 months ago
• dani-lbnl / SC20_pyHPC
  pyHPC workshop
  ☆11Updated 3 years ago
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆64Updated 2 weeks ago