saalfeldlab / n5Links
Not HDF5
☆195Updated last week
Alternatives and similar repositories for n5
Users that are interested in n5 are comparing it to the libraries listed below
Sorting:
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆128Updated 3 weeks ago
- Distributed image processing☆225Updated last month
- A minimal Zarr image viewer based on Viv.☆179Updated 2 weeks ago
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆103Updated 4 months ago
- ☆42Updated last year
- The RPC library used in ImJoy.☆25Updated last year
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆88Updated 2 weeks ago
- A dataset for loading zarr files to be used in machine learning training pipelines☆34Updated 3 weeks ago
- scalable multiscale image pyramids in python☆29Updated last year
- Pydantic models for OME-NGFF☆24Updated 4 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last month
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆152Updated this week
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆221Updated this week
- A Java implementation of the API offered by the Python zarr package☆35Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆87Updated 3 weeks ago
- Zarr filesystem backend for N5☆17Updated last week
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆59Updated this week
- Python based viewer for large mulit-dimensional datasets.☆20Updated 6 years ago
- Scientific colormaps for python, with only numpy dependency☆159Updated 3 weeks ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Updated 2 months ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆47Updated 3 years ago
- native Python dataclasses for the OME data model☆65Updated 3 weeks ago
- Read and write Neuroglancer datasets programmatically.☆170Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- ☆17Updated 3 years ago
- Connecting Java/ImgLib2 + Python/NumPy☆31Updated 6 months ago
- Remote Frame Buffer for Jupyter☆82Updated 2 months ago
- High quality visualization for volumetric image data☆55Updated this week