Not HDF5
☆205Aug 31, 2026Updated this week
Alternatives and similar repositories for n5
Users that are interested in n5 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆134Jul 2, 2026Updated 2 months ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆21Jul 10, 2026Updated last month
- Zarr filesystem backend for N5☆22Updated this week
- ImageJ convenience layer for N5☆21Jun 29, 2026Updated 2 months ago
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Friendly base POM for all SciJava-based software☆28Jul 18, 2026Updated last month
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆109Jul 27, 2026Updated last month
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Oct 17, 2023Updated 2 years ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆76Jul 24, 2026Updated last month
- Block-wise task scheduling for large nD volumes.☆33Updated this week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆69Aug 1, 2026Updated last month
- An implementation of chunked, compressed, N-dimensional arrays for Python.☆2,046Updated this week
- Render transformed image tiles☆37Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A minimal Zarr image viewer based on Viv.☆199Jun 22, 2026Updated 2 months ago
- A library to facilitate machine learning on multi-dimensional images.☆93Aug 3, 2026Updated 3 weeks ago
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆258Updated this week
- Cloud-friendly access to archival data☆365Mar 30, 2026Updated 5 months ago
- ☆116Updated this week
- A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.☆149Aug 3, 2026Updated 3 weeks ago
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so d…☆98Apr 23, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18May 18, 2020Updated 6 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆21Feb 10, 2026Updated 6 months ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆76Aug 25, 2026Updated last week
- Rust implementation of the N5 "Not HDF5" tensor file system format☆17Dec 6, 2022Updated 3 years ago
- Bio-Formats image file format to raw format converter☆111Aug 4, 2026Updated 3 weeks ago
- Image processing algorithms for ImgLib2☆24Feb 21, 2026Updated 6 months ago
- Distributed image processing☆227Aug 3, 2026Updated last month
- Shell scripts for scientific projects written in Java☆17Jul 18, 2026Updated last month
- GPU-accelerated Image Processing library for C++☆16Aug 24, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆428Updated this week
- Library for reading and writing large multi-dimensional arrays.☆1,537Aug 25, 2026Updated last week
- WebGL-based viewer for volumetric data☆1,358Updated this week
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆48Jun 11, 2026Updated 2 months ago
- Pydantic models for Zarr☆49Aug 5, 2026Updated 3 weeks ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- ☆16Jul 6, 2026Updated last month