saalfeldlab / n5
Not HDF5
☆177Updated 3 weeks ago
Alternatives and similar repositories for n5:
Users that are interested in n5 are comparing it to the libraries listed below
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆118Updated last month
- A minimal Zarr image viewer based on Viv.☆148Updated this week
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆93Updated 2 weeks ago
- Distributed image processing☆219Updated 2 weeks ago
- Pydantic models for OME-NGFF☆23Updated last week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆70Updated last week
- scalable multiscale image pyramids in python☆27Updated 9 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆132Updated last month
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated 2 months ago
- A library to facilitate machine learning on multi-dimensional images.☆82Updated 3 weeks ago
- A Java implementation of the API offered by the Python zarr package☆32Updated last month
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆189Updated last week
- ☆40Updated 9 months ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆27Updated 6 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆54Updated this week
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆35Updated 2 weeks ago
- A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.☆137Updated last week
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆45Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last month
- Block-wise task scheduling for large nD volumes.☆30Updated last month
- Remote Frame Buffer for Jupyter☆74Updated 2 months ago
- Scientific colormaps for python, with only numpy dependency☆113Updated 3 weeks ago
- ☆34Updated last week
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- Set of compression filters for h5py☆72Updated 3 weeks ago
- A fully scalable robust image feature extraction library.☆24Updated this week
- A python script editor plugin for napari☆11Updated last year
- serve Zarr datasets via HTTP☆28Updated last year
- The RPC library used in ImJoy.☆24Updated 9 months ago
- A 3D interactivity toolbox for napari☆34Updated 2 weeks ago