Not HDF5
☆201Jun 18, 2026Updated 2 weeks ago
Alternatives and similar repositories for n5
Users that are interested in n5 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆132Jun 15, 2026Updated 2 weeks ago
- Zarr filesystem backend for N5☆21Jun 18, 2026Updated 2 weeks ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆20May 21, 2026Updated last month
- ImageJ convenience layer for N5☆21May 21, 2026Updated last month
- Running compute-intense parts of BigStitcher distributed☆30Jun 26, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Friendly base POM for all SciJava-based software☆28Jun 26, 2026Updated last week
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆107Sep 26, 2025Updated 9 months ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Oct 17, 2023Updated 2 years ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆75Jun 22, 2026Updated last week
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated 2 months ago
- An implementation of chunked, compressed, N-dimensional arrays for Python.☆2,003Jun 26, 2026Updated last week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆68May 27, 2026Updated last month
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A minimal Zarr image viewer based on Viv.☆197Jun 22, 2026Updated last week
- Render transformed image tiles☆36Jun 23, 2026Updated last week
- A library to facilitate machine learning on multi-dimensional images.☆91Jun 1, 2026Updated last month
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆244Jun 23, 2026Updated last week
- Cloud-friendly access to archival data☆363Mar 30, 2026Updated 3 months ago
- ☆115Jun 11, 2026Updated 3 weeks ago
- A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.☆148Jun 20, 2026Updated 2 weeks ago
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆21Feb 10, 2026Updated 4 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so d…☆98Apr 23, 2026Updated 2 months ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18May 18, 2020Updated 6 years ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Jun 25, 2026Updated last week
- Bio-Formats image file format to raw format converter☆109Updated this week
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆119Jun 26, 2026Updated last week
- Rust implementation of the N5 "Not HDF5" tensor file system format☆17Dec 6, 2022Updated 3 years ago
- Image processing algorithms for ImgLib2☆24Feb 21, 2026Updated 4 months ago
- Distributed image processing☆228Jun 22, 2026Updated last week
- Shell scripts for scientific projects written in Java☆17May 4, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- GPU-accelerated Image Processing library for C++☆16Updated this week
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆423Jun 24, 2026Updated last week
- Library for reading and writing large multi-dimensional arrays.☆1,522Updated this week
- WebGL-based viewer for volumetric data☆1,336Jun 27, 2026Updated last week
- A pilot experiment to dissminate information about Janelia's biomaging data formats.☆12Jan 30, 2025Updated last year
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- A napari plugin for zarr backed OME-NGFF images☆52May 28, 2026Updated last month