nalomran / PyReQTLLinks
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.
☆10Updated 4 years ago
Alternatives and similar repositories for PyReQTL
Users that are interested in PyReQTL are comparing it to the libraries listed below
Sorting:
- Accessing AlphaMissense Data Resources in R☆13Updated 2 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆27Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Course Materials for Genomics Data Mining☆22Updated 4 months ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆36Updated 2 weeks ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆42Updated this week
- Snakemake pipeline for running MAJIQ☆23Updated 2 years ago
- University of Cambridge PhD thesis☆16Updated 5 years ago
- Visual exploratory analysis of gene expression data☆45Updated 2 months ago
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Updated 2 months ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆61Updated 5 years ago
- Learning resources originally for a class held December 2020 "Dry bench skills for Researchers". Expanding based upon mini-courses.☆11Updated 4 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal☆14Updated this week
- ☆24Updated last year
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Updated last year
- Explore the cancer relevance of your gene list☆52Updated last month
- ☆18Updated 2 weeks ago
- ☆27Updated 8 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- Analysis for svaseq paper☆20Updated 11 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- ☆26Updated 8 months ago
- Scripts to install as a Bioconda package for making workflows☆18Updated last year
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆17Updated 3 weeks ago
- Template for building a bioconductor workshop package using github actions☆21Updated 7 months ago
- ☆16Updated 10 months ago
- Shiny app for making and annotating Volcano plots☆25Updated last month
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆37Updated 2 years ago