Nextflow plugin to compare runs
☆12Oct 11, 2026Updated 3 weeks ago
Alternatives and similar repositories for nf-diff
Users that are interested in nf-diff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- nf-test utility functions☆13Sep 29, 2026Updated last month
- Nextflow wrapper built around nf-core/modules☆12Nov 25, 2024Updated last year
- A GitHub action to install Nextflow☆31Updated this week
- Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows☆71Updated this week
- Orchestrator skill and subagents for creating/updating, testing, and documenting Nextflow nf-core modules☆16Oct 24, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆18Sep 6, 2025Updated last year
- Generate beautiful API documentation for Nextflow pipelines☆19Aug 9, 2026Updated 2 months ago
- Agent skills for building and running Nextflow pipelines.☆25Updated this week
- Params validation plugin for Nextflow pipelines☆47Aug 7, 2024Updated 2 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆58Updated this week
- Terminal + web UI for browsing Nextflow tasks, logs, and output files☆13Sep 13, 2026Updated last month
- Nextflow workshop materials November 2025☆20Aug 15, 2026Updated 2 months ago
- reComBat package to correct batch effects☆13Jul 17, 2023Updated 3 years ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A manifesto for AI-assisted modernisation of bioinformatics software.☆60Updated this week
- Test data to be used for automated testing with the nf-core pipelines☆163Updated this week
- This repo aims to highlight microbiome-metabolome integration using the python ecosystem.☆10Aug 24, 2026Updated 2 months ago
- Customer workshop materials☆19May 13, 2026Updated 5 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Jul 13, 2021Updated 5 years ago
- A bioinformatics pipeline to phase and impute genetic data☆36Oct 7, 2026Updated 3 weeks ago
- Integrating data from multiple omics modalities to build and analyze feature-level networks.☆11Oct 31, 2025Updated last year
- Nextflow version of Sopa - spatial omics pipeline and analysis☆22Updated this week
- ☆13Oct 20, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 5, 2026Updated 3 weeks ago
- Experimental features for Nextflow☆54Oct 15, 2026Updated 2 weeks ago
- Intermediate Machine Learning course of the Swiss Institute of Bioinformatics☆15Nov 20, 2025Updated 11 months ago
- A novel biclustering algorithm for analyses of transcriptomic data.☆18May 17, 2019Updated 7 years ago
- ☆14Updated this week
- Proteomics label-free quantification (LFQ) analysis pipeline☆39Jan 13, 2025Updated last year
- Proof-of-concept Nextflow pipeline to interact with OpenAI Whisper☆11Jun 17, 2025Updated last year
- Example project using clamp package☆12May 3, 2015Updated 11 years ago
- SBT Auto Plugin to manage client side git hooks☆17Jan 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Course on designing high-throughput experiments☆13Sep 25, 2024Updated 2 years ago
- Scalable reporting of Cromwell task call resource monitoring data to BigQuery☆10Jul 28, 2021Updated 5 years ago
- Webpage for SIB's advanced statistics course☆17Sep 14, 2026Updated last month
- Pairwise genome comparison pipeline using the LAST software to align a list of query genomes to a target genome, and plot the results☆11Updated this week
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Updated this week
- Physalia workshop on Generalized Linear Latent Variable Models by Bert van der Veen☆15Jul 14, 2026Updated 3 months ago
- ☆19Jul 7, 2026Updated 3 months ago