BSMN common data processing pipeline
☆11Jun 6, 2025Updated last year
Alternatives and similar repositories for bsmn-pipeline
Users that are interested in bsmn-pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepMosaic is a deep-learning-based mosaic single nucleotide classification tool without the need of matched control information.☆57May 21, 2026Updated last month
- This repository collects pipelines, codes, and some intermediate results for adult brain somatic mosaicism study.☆15Jun 14, 2025Updated last year
- A mosaic detecting software based on phasing and random forest☆70Dec 8, 2025Updated 7 months ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 7 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆28Feb 14, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 6 years ago
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- Basics of the OSCA book☆15Sep 29, 2025Updated 9 months ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- ☆18Feb 18, 2021Updated 5 years ago
- ☆14May 26, 2020Updated 6 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses☆16Mar 23, 2026Updated 3 months ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Rust binding for WFA2-lib☆10Jun 7, 2022Updated 4 years ago
- A repository for reproducing experiments from the TxPert paper☆41Mar 25, 2026Updated 3 months ago
- ☆12Jan 29, 2025Updated last year
- Pipelines and tools for MRI analysis☆12Jun 14, 2023Updated 3 years ago
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Dec 1, 2023Updated 2 years ago
- A structural variation pipeline for short-read sequencing☆205Updated this week
- bash script to search for centromeric repeat patterns in PacBio data, using several current tools (trf and R)☆13Dec 1, 2016Updated 9 years ago
- ☆13Jan 8, 2020Updated 6 years ago
- Cookiecutter for snakemake slurm profile☆16Jul 22, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Telomerecat: The telomere computational analysis tool☆14Oct 9, 2020Updated 5 years ago
- Useful utilities☆15Apr 7, 2026Updated 3 months ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆10Feb 27, 2023Updated 3 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- find large indels (in the blind spot between GATK/freebayes and SV callers)☆39Dec 3, 2017Updated 8 years ago
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- SV genotyping with long reads☆40Jul 3, 2023Updated 3 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Jul 31, 2024Updated last year
- A high-performance HGVS variant nomenclature parser and normalizer written in Rust☆26Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Jul 1, 2020Updated 6 years ago
- A tool for detecting CNVs from WGS data☆11Jul 9, 2020Updated 6 years ago
- ☆20Jan 27, 2021Updated 5 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17May 26, 2025Updated last year
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Aug 2, 2017Updated 8 years ago
- Estimating repeat spectra and genome length from low-coverage genome skims☆12Aug 6, 2023Updated 2 years ago
- Alignment workflow for Kids-First DRC☆11Feb 12, 2026Updated 5 months ago