menghaowei / ngstoolsLinks
My own tools code for NGS data analysis (Next Generation Sequencing)
☆30Updated 6 years ago
Alternatives and similar repositories for ngstools
Users that are interested in ngstools are comparing it to the libraries listed below
Sorting:
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- Transcriptomics Visualization R package.☆74Updated 7 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 2 weeks ago
- Create KEGG.db Package☆62Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- GENome Organisation Visual Analytics☆81Updated 10 months ago
- Demultiplexes a fastq.☆48Updated 4 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 6 months ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆64Updated last year
- ☆50Updated 7 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆52Updated 3 months ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- ☆29Updated 6 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago
- An elegant package to visualize gene structures☆82Updated 2 years ago
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- DEG analysis and KEGG/GO enrichment analysis☆69Updated 7 years ago
- ☆38Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Extract Sequence from Genome According to Annotation File☆38Updated 7 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- ☆89Updated 5 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated 2 weeks ago
- Motif manipulation functions for R.☆30Updated last month
- Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)☆21Updated 5 years ago