XSLiuLab / TLimmuno2Links
TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning
☆12Updated 2 years ago
Alternatives and similar repositories for TLimmuno2
Users that are interested in TLimmuno2 are comparing it to the libraries listed below
Sorting:
- HLA-I ligand predictor☆43Updated 2 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline☆26Updated last week
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆42Updated last year
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 7 months ago
- ☆37Updated 2 years ago
- ImmuneApp for HLA-I epitope prediction and immunopeptidome analysis☆14Updated last year
- A visualization software for antibody multi sequence alignment☆22Updated last year
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- ☆51Updated 2 years ago
- Antibody-Specific Epitope Mapping☆14Updated 3 months ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆84Updated last year
- ☆20Updated 3 years ago
- ☆42Updated last month
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Updated last year
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆11Updated last year
- ☆96Updated 5 months ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆17Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated last week
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆24Updated 2 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Updated 4 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- PRedictor of IMmunogenic Epitopes☆25Updated 2 months ago
- Feature map and function annotation of Proteins☆34Updated last year
- ☆91Updated last year
- ☆21Updated 3 years ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year