Alternatives and similar repositories for TLimmuno2

Users that are interested in TLimmuno2 are comparing it to the libraries listed below

• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆43Updated 8 months ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆44Updated 2 years ago
• denisbeslic / denovopipeline
  Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
  ☆41Updated last year
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆20Updated last month
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆24Updated 4 months ago
• Abalign / Abalign
  A visualization software for antibody multi sequence alignment
  ☆20Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆72Updated 2 years ago
• X-lab-3D / PANDORA
  MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
  ☆23Updated 2 months ago
• IdoSpringer / ERGO-II
  ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
  ☆33Updated 3 years ago
• mnielLab / NetTCR-2.0
  NetTCR-2.0. Sequence-based prediction of peptide-TCR binding
  ☆35Updated 3 years ago
• kaistomics / DeepNeo
  identification of immunogenic neoepitopes
  ☆12Updated 2 years ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆15Updated 4 years ago
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆56Updated last year
• GfellerLab / MixTCRpred
  Predictor of TCR-epitope interactions
  ☆33Updated last week
• bm2-lab / PanPep
  ☆50Updated last year
• idrblab / rnaincoder
  ☆11Updated 2 weeks ago
• bsml320 / ImmuneApp
  ImmuneApp for HLA-I epitope prediction and immunopeptidome analysis
  ☆14Updated 11 months ago
• TencentAILabHealthcare / DeepAIR
  ☆37Updated 2 years ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆84Updated 3 years ago
• a96123155 / TransPHLA-AOMP
  ☆48Updated 3 years ago
• KarchinLab / mhcnuggets
  MHC Class I and Class II neoantigen binding prediction
  ☆32Updated last month
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆20Updated 2 years ago
• Genentech / Absolve
  Absolve antibody variable domain sequence analysis
  ☆18Updated 7 years ago
• pmoris / ImRex
  Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes
  ☆16Updated 2 years ago
• Guido497 / phase-separation
  ☆15Updated 4 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 2 years ago
• regeneron-mpds / TCRAI
  ☆17Updated 4 years ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆46Updated last year
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆24Updated last year
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆56Updated 3 years ago