Alternatives and similar repositories for TLimmuno2

Users that are interested in TLimmuno2 are comparing it to the libraries listed below

• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆43Updated last month
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆73Updated 2 years ago
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆23Updated last month
• IdoSpringer / ERGO-II
  ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
  ☆34Updated 3 years ago
• denisbeslic / denovopipeline
  Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
  ☆42Updated last year
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆45Updated 2 years ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆24Updated last month
• TencentAILabHealthcare / DeepAIR
  ☆38Updated 2 years ago
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆56Updated last year
• mnielLab / NetTCR-2.0
  NetTCR-2.0. Sequence-based prediction of peptide-TCR binding
  ☆35Updated 3 years ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆16Updated 4 years ago
• Abalign / Abalign
  A visualization software for antibody multi sequence alignment
  ☆20Updated last year
• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆28Updated 6 months ago
• hexavier / CUSTOM
  Codon optimizer for tissue-specific expression
  ☆17Updated last year
• bsml320 / ImmuneApp
  ImmuneApp for HLA-I epitope prediction and immunopeptidome analysis
  ☆14Updated last year
• Genentech / Absolve
  Absolve antibody variable domain sequence analysis
  ☆18Updated 7 years ago
• TRON-Bioinformatics / TCLP
  an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression
  ☆11Updated last year
• X-lab-3D / PANDORA
  MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
  ☆24Updated 4 months ago
• GfellerLab / MixTCRpred
  Predictor of TCR-epitope interactions
  ☆34Updated last month
• bm2-lab / PanPep
  ☆51Updated last year
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆40Updated last year
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆20Updated 3 years ago
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆57Updated 3 years ago
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆40Updated 3 weeks ago
• kekegg / DLEPS
  A Deep Learning based Efficacy Prediction System for drug discovery
  ☆72Updated 2 years ago
• regeneron-mpds / TCRAI
  ☆17Updated 4 years ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆86Updated 3 years ago
• ntranoslab / esm-variants
  ☆80Updated 2 years ago
• Guido497 / phase-separation
  ☆15Updated 4 years ago
• pmoris / ImRex
  Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes
  ☆17Updated 2 years ago