TencentAILabHealthcare / scpDeconv
☆10Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for scpDeconv
- Cell clustering for spatial transcriptomics data with graph neural network☆58Updated last year
- Identify spatial domain☆59Updated last year
- ☆91Updated 8 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆64Updated 6 months ago
- Her2 Breast Cancer Project☆57Updated last year
- ☆45Updated 2 weeks ago
- ☆25Updated 5 months ago
- Single-cell biological network inference using a heterogeneous graph transformer☆67Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆29Updated 7 months ago
- ☆34Updated 11 months ago
- Spatial-Linked Alignment Tool☆81Updated 5 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆63Updated 2 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆53Updated 5 months ago
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆198Updated last year
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆30Updated last year
- ☆10Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆38Updated last year
- overview of spatial datasets☆69Updated 9 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆46Updated last year
- ☆15Updated last month
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆71Updated 5 months ago
- ☆28Updated last year
- a unified single-cell data integration framework by optimal transport☆31Updated last month
- Transformer for One-Stop Interpretable Cell-type Annotation☆131Updated 8 months ago
- ☆95Updated last month
- ☆49Updated 3 months ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆134Updated 3 months ago
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆17Updated 6 months ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆17Updated last month
- ☆108Updated 2 years ago