BioC++ core library (alphabet, meta, ranges)
☆21Jul 21, 2023Updated 3 years ago
Alternatives and similar repositories for biocpp-core
Users that are interested in biocpp-core are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.☆465Oct 17, 2026Updated 2 weeks ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 5 months ago
- ☆32Aug 2, 2022Updated 4 years ago
- ☆16Dec 22, 2025Updated 10 months ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆21Jul 19, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Nov 8, 2023Updated 2 years ago
- A runtime type system for R; interfaces, enums, typed data.frames/data.tables and functions. CRAN☆25Sep 13, 2024Updated 2 years ago
- Species Level Identification of Microbes from Metagenomes☆27Apr 30, 2019Updated 7 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 5 months ago
- C++ 𝗥ange 𝗔𝐝aptors 𝗥eimagined☆12Updated this week
- An experimental AI agent workflow.☆17Oct 11, 2025Updated last year
- RNAcode - Detecting protein coding genes in multiple sequence alignment☆27Aug 22, 2024Updated 2 years ago
- ☆10May 23, 2023Updated 3 years ago
- Recognizing HGT Events in Assemblies☆10May 12, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated 3 months ago
- ☆29Mar 13, 2026Updated 7 months ago
- SeqAn's official repository.☆501Aug 11, 2026Updated 2 months ago
- A simple to use, single header, tag_invoke utility for C++11.☆16Nov 27, 2022Updated 3 years ago
- Fast interval intersection library☆44Oct 28, 2026Updated last week
- Tools to explore Minimum Decycling Sets (MDSs) of the de Bruijn graph☆12Sep 11, 2025Updated last year
- bíogo data store repository☆39Nov 20, 2020Updated 5 years ago
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 6 months ago
- Raspberry Pi family support for Genode OS framework (migrated to codeberg.org)☆17Jan 29, 2026Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Apr 6, 2021Updated 5 years ago
- Ancestry and Kinship Tools☆70Apr 20, 2026Updated 6 months ago
- SNAPPY Nucleic Acid Processing in Python☆10Oct 26, 2026Updated last week
- Analyzing sketching and sampling approaches for fast and accurate read classification☆10Aug 30, 2022Updated 4 years ago
- ☆10Jan 23, 2021Updated 5 years ago
- Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)☆58Mar 4, 2024Updated 2 years ago
- tg fitness tracking bot☆15Updated this week
- RNA sequence design for a target protein sequence☆13Jun 2, 2026Updated 5 months ago
- A comprehensive computational pipeline that bridges single-cell genomics and cheminformatics to accelerate Alzheimer's Disease research. …☆12Jul 13, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.☆23Sep 21, 2026Updated last month
- Strain-level abundance analysis tool for short-read metagenomics☆12Jul 12, 2026Updated 3 months ago
- Evaluate the performances (precision and recall) of structural variation (SV) callers☆37Sep 8, 2025Updated last year
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- ♥ Efficient Estimation of Evolutionary Distances☆47Sep 8, 2026Updated last month
- For more details about Mobster please see☆10Dec 7, 2022Updated 3 years ago
- PANPROVA: PANgenomic PROkaryotic eVolution of full Assemblies☆10Jun 14, 2026Updated 4 months ago