usegalaxy-eu / usegalaxy-eu-toolsLinks
List of tools included in https://usegalaxy.eu
☆34Updated this week
Alternatives and similar repositories for usegalaxy-eu-tools
Users that are interested in usegalaxy-eu-tools are comparing it to the libraries listed below
Sorting:
- UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)☆22Updated last week
- Handy command line utility for Galaxy administrators☆24Updated 2 months ago
- Galaxy Admin Training☆60Updated 2 weeks ago
- Testing building mulled containers for multi-requirement tools.☆80Updated 3 weeks ago
- ENA upload cli - script your Open Data upload to the European Nucleotide Archive☆29Updated last month
- An easy-to-use way for running Galaxy workflows.☆20Updated 6 years ago
- Utilities for building and managing bioconda recipes☆103Updated last month
- Galaxy RNA workbench☆40Updated 5 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆50Updated 5 years ago
- Galaxy Language Server to help in Galaxy (https://galaxyproject.org/) tool wrappers development.☆25Updated 3 weeks ago
- cache packages permanently☆15Updated 2 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆95Updated 2 weeks ago
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome data…☆36Updated last year
- Reference genome resource manager☆74Updated 2 years ago
- Protein Alignment and Detection Interface☆60Updated last year
- conda recipes for genomic data☆84Updated 4 years ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆44Updated last week
- Awesome resources related to Galaxy project☆11Updated last year
- gatk4 RNA variant calling pipeline☆55Updated last week
- Demonstrating best practices for bioinformatics command line tools☆116Updated 5 years ago
- YAMP: Yet Another Metagenomic Pipeline☆61Updated 2 years ago
- viral-ngs: complete pipelines☆68Updated last week
- Open-source opinionated Galaxy-based framework for microbiota analysis☆14Updated 4 years ago
- Config files used to define parameters specific to compute environments at different Institutions☆104Updated this week
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- Galaxy tools and workflows developed at the Earlham Institute☆14Updated 2 weeks ago
- A collection of modules and sub-workflows for Nextflow☆28Updated last month