bio-learn / biolearnLinks
Machine learning tools for biomarker analysis
☆75Updated last week
Alternatives and similar repositories for biolearn
Users that are interested in biolearn are comparing it to the libraries listed below
Sorting:
- A Python-based compendium of GPU-optimized aging clocks.☆116Updated last week
- Tabula Muris Senis☆108Updated 2 years ago
- Code for the calculation and implementation of the PC Based epigenetic clocks☆60Updated last month
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆98Updated 2 months ago
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆45Updated 2 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆58Updated 8 months ago
- ☆67Updated last year
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆90Updated last year
- A package to estimate biological organ age using SomaScan plasma proteomics data☆64Updated last year
- CMap Notebooks for LINCS 2020 Workshop☆49Updated 4 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆77Updated 10 months ago
- What you need to process the Quarterly DepMap-Omics releases from Terra☆125Updated this week
- netZooPy is a network biology package implemented in Python.☆94Updated last week
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆59Updated 3 weeks ago
- ☆70Updated last week
- ☆69Updated 6 months ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- Framework for Interpretable Neural Networks☆113Updated 9 months ago
- ☆30Updated 7 months ago
- A new extended cell deconvolution for peripheral blood☆18Updated 10 months ago
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆178Updated last month
- ☆98Updated 2 months ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- ACTIONet single-cell analysis framework☆44Updated last year
- R client for the OmniPath web service☆149Updated last month
- CpGPT: a Foundation Model for DNA Methylation.☆64Updated 3 weeks ago
- Formalizing and benchmarking open problems in single-cell genomics☆57Updated 7 months ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 10 months ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago