Code for the calculation and implementation of the PC Based epigenetic clocks
☆61Dec 9, 2025Updated 4 months ago
Alternatives and similar repositories for PC-Clocks
Users that are interested in PC-Clocks are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Oct 5, 2022Updated 3 years ago
- ☆13Jun 24, 2019Updated 6 years ago
- Profiling epigenetic age in single cells☆45Dec 11, 2021Updated 4 years ago
- Code to implement the DunedinPACE scoring algorithm in Illumina 450k or EPIC array data☆48Jun 6, 2025Updated 10 months ago
- Machine learning tools for biomarker analysis☆80Apr 21, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Predict epigenetic age from DNA methylation data☆73Apr 9, 2026Updated 3 weeks ago
- DNA methylation-based clocks☆54Apr 9, 2026Updated 3 weeks ago
- A new extended cell deconvolution for peripheral blood☆18Feb 28, 2025Updated last year
- ☆14Mar 26, 2024Updated 2 years ago
- Epigenetic Smoking status Estimator☆10Nov 24, 2020Updated 5 years ago
- Biological insights into the epigenetic ageing clock☆11Feb 11, 2020Updated 6 years ago
- ☆41May 27, 2025Updated 11 months ago
- Guided Auto Encoder☆16Jul 27, 2017Updated 8 years ago
- This program analyzes methylation levels at six CpG sites in the genome of blood cells to produce a prediction of an individual's biologi…☆26Sep 3, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Python-based compendium of GPU-optimized aging clocks.☆124Feb 18, 2026Updated 2 months ago
- Complex Disease Epigenomics Group's quality control and analysis pipelines for DNA methylation arrays, SNP arrays, BS-Seq, ATAC-Seq and C…☆11Updated this week
- NanopolishComp is a Python3 package for downstream analyses of Nanopolish output files☆10Dec 22, 2020Updated 5 years ago
- Visualizing Intergenerational Wealth Mobility and Racial Inequality☆10Mar 21, 2019Updated 7 years ago
- ☆24Feb 2, 2025Updated last year
- GoDMC analysis pipeline☆17Aug 21, 2020Updated 5 years ago
- DNA methylation studies of mammalian species☆43Jan 21, 2026Updated 3 months ago
- CpGPT: a Foundation Model for DNA Methylation.☆71Dec 28, 2025Updated 4 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Calculate DNA methylation age using Horvath 2013 method☆11Aug 25, 2017Updated 8 years ago
- ☆16Nov 2, 2020Updated 5 years ago
- AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation☆14Sep 26, 2020Updated 5 years ago
- ☆11Aug 12, 2022Updated 3 years ago
- Junction Tree Variational AutoEncoder Implementation Attempt☆11Jun 21, 2018Updated 7 years ago
- Code referenced in the manuscript 'The 16S rRNA gene for species and strain-level microbiome analysis'☆11Sep 26, 2019Updated 6 years ago
- Imputation steps using the Michigan or Sanger imputation server.☆16May 6, 2021Updated 4 years ago
- Proportional Odds Logistic Mixed Model (POLMM) for ordinal categorical data analysis☆11Aug 26, 2022Updated 3 years ago
- ☆12Sep 4, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆27Jul 28, 2025Updated 9 months ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Mar 26, 2019Updated 7 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- This repository provides the dataset and code of Interpretable machine learning prediction of all-cause mortality.☆25Oct 5, 2022Updated 3 years ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆24Mar 28, 2022Updated 4 years ago
- miRTrace☆12Jun 14, 2023Updated 2 years ago