Alternatives and similar repositories for proteomic-age-ukb

Users that are interested in proteomic-age-ukb are comparing it to the libraries listed below

• hamiltonoh / organage
  A package to estimate biological organ age using SomaScan plasma proteomics data
  ☆60Updated last year
• jasonHKU0907 / DementiaProteomicPrediction
  ☆48Updated 8 months ago
• NCICCGPO / gdan-tmp-models
  Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.
  ☆28Updated 6 months ago
• jasonHKU0907 / FutureHealthProteomicPrediction
  ☆46Updated last year
• comp-med / sparse-proteomic-prediction-of-common-and-rare-diseases
  This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…
  ☆18Updated last year
• YangLabHKUST / MR-APSS
  Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics
  ☆43Updated 6 months ago
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆55Updated 2 years ago
• UK-Biobank / UKB-RAP-Notebooks-Genomics
  UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…
  ☆24Updated last year
• suinleelab / deepprofile-study
  Code for paper "A deep profile of gene expression across 18 human cancers"
  ☆28Updated 10 months ago
• jasonHKU0907 / proteome-phenome-atlas
  ☆68Updated 8 months ago
• sritchie73 / ukbnmr
  Tools for processing Nightingale NMR biomarker data in UK Biobank
  ☆42Updated 2 months ago
• novonordisk-research / xOAML
  xOAML - NatComms
  ☆16Updated last year
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆71Updated 2 years ago
• CNRGH / crimmix
  ☆17Updated 5 years ago
• llniu / ALD-study
  ALD study data analysis
  ☆13Updated 2 years ago
• Danko-Lab / TED
  a fully Bayesian approach to deconvolve tumor microenvironment
  ☆60Updated 3 years ago
• Zaoqu-Liu / SurvivalML
  Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors
  ☆32Updated 7 months ago
• JianYang-Lab / MeDuSA
  MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…
  ☆43Updated 8 months ago
• YuanTian1991 / ChAMP
  ☆24Updated last month
• JinmiaoChenLab / ezSingleCell2
  ☆57Updated last year
• xuyu-cam / atlas_genetic_scores_omic_traits
  This repository houses scripts for training genetic scores of omic traits in INTERVAL
  ☆26Updated 2 years ago
• UK-Biobank / UKB-RAP-Notebooks-Access
  UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).
  ☆126Updated 4 months ago
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆126Updated last year
• MRCIEU / epigraphdb-pqtl
  This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
  ☆41Updated 4 years ago
• SmritiChawla / Precily
  ☆31Updated 3 years ago
• dnanexus / UKB_RAP
  Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…
  ☆205Updated last year
• MGormley12 / metabolic_trait_hnc_mr
  The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis
  ☆12Updated 2 years ago
• jingxinfu / TIDEpy
  TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…
  ☆35Updated 3 years ago
• jaspershen-lab / ipop_aging
  Code for aging project
  ☆54Updated last year
• BostonGene / Kassandra
  Bostongene cell deconvolution algorithm from RNAseq
  ☆57Updated last year