lcpilling / ukbrapRLinks
R package for working in the UK Biobank Research Analysis Platform (RAP)
☆66Updated 3 months ago
Alternatives and similar repositories for ukbrapR
Users that are interested in ukbrapR are comparing it to the libraries listed below
Sorting:
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 4 months ago
- LDlinkR☆60Updated last year
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆41Updated last month
- Software implementing the Latent Causal Variable Model☆64Updated 5 years ago
- R package for CAUSE☆56Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆90Updated 2 years ago
- R interface to the IEU GWAS database API☆99Updated 2 months ago
- An R package to create forestplots of measures of effects with their confidence intervals.☆64Updated 4 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- R package of useful functions for one-sample Mendelian randomization and instrumental variable analyses☆23Updated 2 weeks ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆29Updated 2 years ago
- Reading, querying and writing GWAS summary data in VCF format☆85Updated 4 months ago
- Pair-wise conditional analysis and colocalisation☆40Updated last year
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- Genetics ToolboX R package☆32Updated 5 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆36Updated last year
- GWAS for survival analysis in large cohorts☆22Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆151Updated 2 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆26Updated 4 years ago
- An R package for Mendelian Randomization☆38Updated last year
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- lhcMR☆26Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆56Updated 4 years ago
- MVMR R Package☆51Updated 3 weeks ago
- R package for quality control of plink genetic datasets☆60Updated last month
- Non-linear Mendelian randomization☆54Updated last year
- A list of awesome tools for complex trait genetics.☆74Updated 8 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- Bayesian multi-response Mendelian randomisation☆20Updated 6 months ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 7 months ago