bcgsc / poriLinks
Platform for Oncogenomic Reporting and Interpretation (PORI)
☆35Updated last month
Alternatives and similar repositories for pori
Users that are interested in pori are comparing it to the libraries listed below
Sorting:
- Clinical interpretation of somatic mutations in cancer☆49Updated 8 months ago
- Python package to annotate and visualize gene fusions.☆64Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated 2 months ago
- ☆39Updated 4 months ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Updated 4 years ago
- Builds a PEP from SRA or GEO accessions☆53Updated this week
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 weeks ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 3 weeks ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Comprehensive analysis of small RNA sequencing data☆33Updated 5 months ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- ☆44Updated 7 years ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- ☆39Updated 5 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Tumour stratification by maximum-likelihood repeated evolution from multi-region sequencing data☆66Updated 2 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆37Updated 3 years ago
- Explore and download data from the recount3 project☆36Updated last month
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆40Updated last year
- A comprehensive toolkit for mutational signature analysis☆41Updated last year
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- WES HLA Typing based on multiple alternative tools☆18Updated 4 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆53Updated 3 years ago