bcgsc / poriLinks
Platform for Oncogenomic Reporting and Interpretation (PORI)
☆35Updated 3 weeks ago
Alternatives and similar repositories for pori
Users that are interested in pori are comparing it to the libraries listed below
Sorting:
- Clinical interpretation of somatic mutations in cancer☆48Updated 7 months ago
- Explore the cancer relevance of your gene list☆52Updated 3 weeks ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆51Updated 3 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 10 months ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆78Updated 4 months ago
- Python package to annotate and visualize gene fusions.☆64Updated last year
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago
- ☆44Updated 6 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆36Updated 3 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Updated 4 years ago
- ☆39Updated 5 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 6 years ago
- Builds a PEP from SRA or GEO accessions☆53Updated 3 months ago
- ☆20Updated 3 years ago
- ☆39Updated 3 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆79Updated last week
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆31Updated last year
- In-silico method written in Python and R to determine HLA genotypes of a sample. seq2HLA takes standard RNA-Seq sequence reads in fastq f…☆49Updated 2 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆86Updated 4 months ago
- Epimap processing and analysis code repository☆33Updated 3 years ago
- Comprehensive analysis of small RNA sequencing data☆33Updated 5 months ago
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆29Updated 6 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago