astrazeneca-cgr-publications / milton-releaseLinks
MILTON: Disease prediction with biomarkers and augmented PheWAS analyses
☆42Updated last year
Alternatives and similar repositories for milton-release
Users that are interested in milton-release are comparing it to the libraries listed below
Sorting:
- Python package to load and query ARCHS4 data☆24Updated 5 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆76Updated 9 months ago
- ☆21Updated 3 years ago
- Code space for 'Evaluation of large language models for discovery of gene set function'☆42Updated last year
- ☆19Updated 3 weeks ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- Refining the impact of genetic evidence on clinical success☆27Updated last year
- Functional Embedding of Gene Signatures☆48Updated last year
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆27Updated last year
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆57Updated 7 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆58Updated 7 months ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 9 months ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆61Updated 5 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated 3 weeks ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆30Updated last month
- A collection of useful functions for bioinformatics data analysis☆24Updated 3 weeks ago
- ☆34Updated 7 months ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 3 weeks ago
- ☆31Updated 6 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆32Updated last year
- ☆38Updated 2 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆39Updated 3 months ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year