msantolini / dynamoLinks
DYNamics Agnostic Network MOdels
☆18Updated 7 years ago
Alternatives and similar repositories for dynamo
Users that are interested in dynamo are comparing it to the libraries listed below
Sorting:
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…☆13Updated 6 years ago
- Volume-regularized NMF☆17Updated 3 years ago
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Updated 6 years ago
- Single cell network synthesis toolkit☆23Updated 4 years ago
- ☆13Updated 4 months ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24Updated 2 months ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Core utilities for single-cell RNA-seq☆12Updated 3 months ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 6 years ago
- ☆14Updated last year
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆29Updated 5 years ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆45Updated 7 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Updated 6 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- ☆95Updated last year
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- ☆31Updated 6 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated 6 months ago
- Single sample network reconstruction in R☆22Updated 5 years ago
- Citrus Development Code☆31Updated last year
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- We have moved to https://github.com/limix/limix.☆24Updated 7 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆56Updated 2 years ago