LiuLab-Bioelectronics-Harvard / UnitedNet
☆42Updated 11 months ago
Alternatives and similar repositories for UnitedNet:
Users that are interested in UnitedNet are comparing it to the libraries listed below
- ☆50Updated 2 months ago
- Cell clustering for spatial transcriptomics data with graph neural network☆59Updated last year
- ☆27Updated last year
- Identify spatial domain☆65Updated last year
- ☆38Updated 2 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆51Updated 7 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆80Updated last month
- a unified single-cell data integration framework by optimal transport☆34Updated 5 months ago
- ☆10Updated 11 months ago
- Code for evaluating single cell foundation models scBERT and scGPT☆37Updated 6 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆37Updated 2 years ago
- Single-Cell (Perturbation) Model Library☆39Updated this week
- Multi-omics integration method using AE and GCN☆33Updated last year
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆63Updated last month
- ☆51Updated 2 weeks ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆137Updated last year
- Single-cell spatial elucidation through image-augmented graph transformer☆31Updated last year
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆153Updated 3 years ago
- ☆29Updated last year
- ☆42Updated last year
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆16Updated 5 months ago
- ☆72Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆70Updated last week
- Deep joint-leaning single-cell multi-omics model☆16Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆53Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆48Updated 8 months ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆19Updated last year
- ☆17Updated 4 months ago
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆74Updated 4 months ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆32Updated 2 years ago