Alternatives and similar repositories for PROSTATA

Users that are interested in PROSTATA are comparing it to the libraries listed below

• AIRI-Institute / SEMAi
  Spatial Epitope Modeling with Artificial intelligence (SEMA)
  ☆44Updated last year
• Doudna-lab / GARNET_DL
  ☆36Updated 10 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 5 months ago
• JudeWells / chainsaw
  ☆44Updated last year
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 7 months ago
• strodel-group / TransMEP
  Transfer learning for Mutation Effect Prediction
  ☆17Updated last year
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆24Updated 5 months ago
• biofold / ddgun
  predict stability change upon mutation
  ☆28Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆35Updated 7 months ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• jas-preet / SPOT-1D-Single
  The standalone version of SPOT-1D-Single available for public use for research purposes.
  ☆24Updated last year
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆58Updated 3 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 8 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆47Updated 6 months ago
• Exscientia / abodybuilder3
  ☆71Updated last year
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 7 months ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆39Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆34Updated 2 years ago
• proteinphysiologylab / frustratometeR
  ☆37Updated 4 months ago
• hefeda / PGP
  ☆41Updated 2 months ago
• wells-wood-research / timed-design
  Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis
  ☆60Updated 3 weeks ago
• TobiasHeOl / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 8 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆46Updated 7 months ago
• kiharalab / NuFold
  NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation
  ☆46Updated 2 weeks ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 3 weeks ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆61Updated 2 years ago
• ronboger / conformal-protein-retrieval
  ☆16Updated 2 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 7 months ago
• AbSciBio / igdesign
  ☆47Updated 10 months ago