Rostlab / predictprotein-docker
Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository will result in a fully functioning predictprotein suite, including all of its required methods. Databases are not included.
☆13Updated 2 years ago
Alternatives and similar repositories for predictprotein-docker
Users that are interested in predictprotein-docker are comparing it to the libraries listed below
Sorting:
- GraphPart, a data partitioning method for ML on biological sequences☆26Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- a collection of colabs useful for molecular biology☆30Updated last year
- Predict the structure of immune receptor proteins☆48Updated 6 months ago
- ☆30Updated this week
- ☆38Updated 7 months ago
- A domain parser for Alphafold models☆36Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆37Updated 2 weeks ago
- Protein Structure Archiver☆12Updated 11 months ago
- Machine learning prediction of enzyme optimum pH☆36Updated 2 weeks ago
- Fast protein domain structure embedding+search tool☆20Updated last week
- DeepECtransformer☆24Updated last year
- ☆18Updated 2 months ago
- ☆34Updated 2 weeks ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- ☆36Updated 4 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆84Updated last year
- Graph Network for protein-protein interface including language model features☆31Updated last year
- ☆24Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 5 months ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆22Updated 2 weeks ago
- ☆36Updated 7 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆44Updated 4 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆36Updated 7 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆39Updated last week
- Detection of remote homology by comparison of protein language model representations☆53Updated 5 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 5 months ago
- ☆22Updated 2 years ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆29Updated last year