Rostlab / predictprotein-dockerLinks
Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository will result in a fully functioning predictprotein suite, including all of its required methods. Databases are not included.
☆13Updated 2 years ago
Alternatives and similar repositories for predictprotein-docker
Users that are interested in predictprotein-docker are comparing it to the libraries listed below
Sorting:
- ☆26Updated 6 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- Long disorder consensus predictor☆17Updated 4 months ago
- Fast and accurate protein structure prediction☆56Updated 11 months ago
- ☆36Updated 11 months ago
- Predict the structure of immune receptor proteins☆58Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 4 months ago
- ☆19Updated last month
- predict stability change upon mutation☆29Updated last year
- Geometry-aware protein binding site predictor☆25Updated last year
- This repository contains the stand-alone tool for MusiteDeep server☆35Updated 5 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆38Updated 4 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆61Updated 9 months ago
- a collection of colabs useful for molecular biology☆31Updated last year
- PLM-interact: extending protein language models to predict protein-protein interactions.☆54Updated 4 months ago
- ☆39Updated 4 years ago
- Evolutionary velocity with protein language models☆95Updated last month
- ☆48Updated last month
- GraphPart, a data partitioning method for ML on biological sequences☆33Updated 2 years ago
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆14Updated 3 years ago
- ☆25Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Code for LazyAF pipeline☆21Updated last year
- Graph Network for protein-protein interface including language model features☆34Updated last year
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆15Updated 8 months ago
- ☆32Updated 3 months ago
- Evolutionary conservation estimation of residues or nucleotides☆56Updated 3 years ago