YaoLab-Bioinfo / funRiceGenes
The knowledge of cloned rice genes lost in the information of rice functional genomics studies
☆24Updated last year
Alternatives and similar repositories for funRiceGenes:
Users that are interested in funRiceGenes are comparing it to the libraries listed below
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Updated last year
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 3 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆17Updated 2 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆13Updated 2 years ago
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆34Updated last month
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆25Updated 5 years ago
- Integrative analysis of structural variations.☆40Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- Codes for the lettuce resequencing project in 2020☆28Updated 3 years ago
- ☆16Updated 11 months ago
- Plant small RNA target prediction tool☆26Updated 8 years ago
- Evolutionary Transcriptomics with R☆41Updated this week
- web documentation for Trinotate☆48Updated last year
- De novo annotation of young retrotransposons☆46Updated 2 years ago
- ☆21Updated 6 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Updated 2 months ago
- A repo contains historical and updated MTEC libraries.☆17Updated 4 years ago
- Transposable element polymorphism identification☆32Updated 4 years ago
- QTL mapping with binmap data☆17Updated 5 years ago
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated last month
- ☆11Updated 2 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- ☆29Updated last week
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆55Updated 2 months ago
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 3 weeks ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 5 years ago
- A (very) simple script to QC Hi-C data.☆25Updated last month