clindet / rctl
A set of command line tools based on R and JavaScript.
☆18Updated 4 years ago
Alternatives and similar repositories for rctl:
Users that are interested in rctl are comparing it to the libraries listed below
- anor: an annotation and visualization system based on R and Shiny framework☆33Updated 4 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆15Updated 6 years ago
- Long read to rMATS☆31Updated last year
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- common useful script☆32Updated 3 weeks ago
- ☆51Updated 5 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆20Updated 7 years ago
- A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.☆19Updated 6 years ago
- Version II of Mandalorion☆32Updated 5 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆25Updated 2 years ago
- DriverPower☆26Updated this week
- Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxfo…☆20Updated 5 years ago
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Updated last month
- a complete reference book for clusterProfiler and its sub-packages☆13Updated 3 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆27Updated 3 weeks ago
- A command line tool to compute mapping statistics from a BAM file☆23Updated 2 years ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- ☆17Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- ☆18Updated 6 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆19Updated 6 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆27Updated 6 years ago
- Documentation for vcfR☆10Updated 2 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 4 years ago
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆13Updated last year
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated 3 weeks ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated last year