Accurate estimation of off-target editing activity from comparative NGS data
☆13Jan 22, 2024Updated 2 years ago
Alternatives and similar repositories for crispector
Users that are interested in crispector are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆42Oct 8, 2026Updated last week
- A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file☆22Oct 26, 2020Updated 5 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆22Aug 8, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- Interactive demos of sequence algorithms☆26Updated this week
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆14Oct 18, 2021Updated 5 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- ☆11Jul 2, 2026Updated 3 months ago
- Variant-aware CRISPR off-target nomination☆28Oct 8, 2026Updated last week
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆31Oct 14, 2026Updated last week
- Scripts for analyzing PacBio AAV sequences☆15May 3, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆15Aug 10, 2026Updated 2 months ago
- for visual evaluation of read support for structural variation☆56Jun 4, 2024Updated 2 years ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 5 years ago
- Mitochondrial Genome Assembly☆17Feb 21, 2024Updated 2 years ago
- Assemblies from HPP Year 1 production☆83May 9, 2023Updated 3 years ago
- Small R package with some functions to visualize DGE results downstream of DESeq2☆12Jul 6, 2023Updated 3 years ago
- A python package for fitting a wide variety of Mixture Models☆15Aug 24, 2024Updated 2 years ago
- Biological sequence visualization functions in R☆13May 28, 2026Updated 4 months ago
- A julia wrapper for Leiden algorithm to discover and plot the communities of a network.☆10Jun 10, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated last year
- scRNAseq clustering tool☆11Apr 14, 2020Updated 6 years ago
- ☆12Aug 3, 2025Updated last year
- Easy to define segments in y-axis for 'ggplot2'.☆27Oct 6, 2019Updated 7 years ago
- Demo code running on ESP32 micro, showing FreeRTOS concepts + MQTT + LED Strip + Accelerometer☆10Feb 7, 2017Updated 9 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆358Oct 8, 2026Updated last week
- Symmetric DUST for finding low-complexity regions in DNA sequences☆48Jul 24, 2025Updated last year
- A tidy interface for coverage analysis☆33Feb 18, 2020Updated 6 years ago
- The UKB Git Audit Tool is a utility designed to audit Git repositories for potential public exposure of UK Biobank data. It performs a co…☆19Apr 30, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 9 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Jan 28, 2020Updated 6 years ago
- A versatile and lightning fast package for processing 10X, inDrop and Drop-seq data.☆14Feb 3, 2019Updated 7 years ago
- ALFA: Annotation Landscape for Aligned Reads☆14Jun 30, 2020Updated 6 years ago
- Variant Calling for the HPRC2☆19May 26, 2026Updated 4 months ago
- k-mer counting software☆43Feb 8, 2022Updated 4 years ago
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago