Young-gonKim / SnackVarLinks
☆12Updated 3 years ago
Alternatives and similar repositories for SnackVar
Users that are interested in SnackVar are comparing it to the libraries listed below
Sorting:
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆49Updated this week
- Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products☆36Updated last month
- A continually expanding collection of RNA-seq tools☆51Updated 9 months ago
- ☆13Updated 2 weeks ago
- ☆58Updated last week
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆28Updated 4 years ago
- HLA typing for Sanger Based Test☆17Updated 2 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 3 months ago
- pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs☆29Updated 2 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆65Updated 2 weeks ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆67Updated last week
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Updated 2 years ago
- CrossMap is a python program to lift over genome coordinates from one genome version to another.☆85Updated last month
- Analysis pipeline for the GUIDE-seq assay.☆26Updated 2 months ago
- Microsatellite Analysis for Normal-Tumor InStability☆72Updated 3 years ago
- Clinical interpretation of somatic mutations in cancer☆47Updated 5 months ago
- Plot stacked logos for single or multiple DNA, RNA and amino acid sequence☆17Updated 3 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated 2 months ago
- Workflows for converting between sequence data formats☆38Updated 3 years ago
- My bioinfo toolbox☆50Updated 5 months ago
- A small-RNA sequencing analysis pipeline☆87Updated last month
- A Python module to analyze Sanger sequencing results.☆24Updated last year
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆44Updated last year
- Tumor Mutational Burden☆62Updated 10 months ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆173Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 5 months ago
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from…☆31Updated last month
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- Analysis pipeline for the GUIDE-seq assay.☆78Updated 2 years ago