off-targeting assessment of Cas9 gRNAs
☆15Apr 27, 2021Updated 5 years ago
Alternatives and similar repositories for crisproff
Users that are interested in crisproff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Package to Score Sequences using Rule Set 3☆18Nov 10, 2025Updated 11 months ago
- CRISPR Cas9 ontarget prediction software☆34Jul 14, 2026Updated 3 months ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆31Oct 14, 2026Updated 2 weeks ago
- a guideRNA database generation tool☆21Mar 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Jul 14, 2023Updated 3 years ago
- UC Berkeley PhD thesis template☆11Jun 5, 2016Updated 10 years ago
- Accurate estimation of off-target editing activity from comparative NGS data☆13Jan 22, 2024Updated 2 years ago
- Get your science on a leash!☆29Oct 22, 2026Updated last week
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 3 years ago
- Flexible analysis of high-content CRISPR screening☆36Sep 14, 2026Updated last month
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆32Jul 28, 2022Updated 4 years ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Using k-mers to call HLA alleles in RNA sequencing data☆23Jul 26, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- Modeling variable guide efficiency in pooled CRISPR screens with ContrastiveVI+☆11May 5, 2025Updated last year
- Uses cDBG to count unitigs in bacterial populations☆20Feb 15, 2023Updated 3 years ago
- Epigenomics Program pipeline to analyze SHARE-seq data.☆23Mar 30, 2025Updated last year
- ☆13Jul 23, 2020Updated 6 years ago
- ☆12Oct 24, 2025Updated last year
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆18Apr 8, 2021Updated 5 years ago
- Python module to analyse CRISPR-based libraries☆16Apr 1, 2021Updated 5 years ago
- Study management software for lab-based research organizations☆12Jan 7, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆14Oct 18, 2021Updated 5 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆35Oct 14, 2026Updated 2 weeks ago
- Masked Omics Modeling for Multimodal Representation Learning across Histopathology and Molecular Profiles☆18Jul 29, 2026Updated 3 months ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 3 years ago
- RIME schema and dict files for Hakka dialect in Taiwan☆13Feb 18, 2020Updated 6 years ago
- Deep neural networks implemented in TensorFlow & Python for predicting whether transcription factors will bind to given DNA sequences☆15Dec 9, 2016Updated 9 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 16, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Source codes and examples for DeepPrime☆15Dec 17, 2024Updated last year
- Variant-aware CRISPR off-target nomination☆28Oct 8, 2026Updated 3 weeks ago
- Shiny ClinVar web server source code☆13Apr 29, 2019Updated 7 years ago
- Scripts and reference files to type Group A Streptococcus☆11Aug 31, 2026Updated last month
- A repository for neural representational learning of RNA secondary structures☆33Feb 13, 2020Updated 6 years ago
- ☆15Aug 10, 2026Updated 2 months ago